Pairwise Alignments

Query, 966 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 942 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  554 bits (1428), Expect = e-162
 Identities = 331/925 (35%), Positives = 500/925 (54%), Gaps = 23/925 (2%)

Query: 57  SLSNLRDSLRNKLRNSVALTLPDHDVPVLFGTQKNVKRIQSSATVSGEELKSFPTPQVGL 116
           S++  RDS+  K+ N+        +  + +GT++ ++   S AT++GE L+    P +  
Sbjct: 26  SIAMERDSV--KMENTAIPASYGRNTHIAYGTERALRVTGSMATINGESLQKTFVPTLSN 83

Query: 117 MLYGKLPGLYVVQNNFQLGSDEPAISLRG------RTPLVVIDGVPRSYLSIDPEQIESI 170
            L+G+LPGL V+  + + G DEP + +RG       TPLV++DG   S+  +   +IES+
Sbjct: 84  TLFGRLPGLTVMHGSGEPGYDEPNLLVRGLGTMNDATPLVMVDGFEASFDQLSAYEIESV 143

Query: 171 SVIKDALGTALYGMKAADGMLLITTKRGANMPKQITFTSQYGIQQQIERPKFLDAFNYAT 230
           SV+KDA   ALYGM+ A+G+LL+TTKRG+    QI FT++ G Q+    P F++A+ YA+
Sbjct: 144 SVLKDAAAVALYGMRGANGVLLVTTKRGSAGDTQIRFTARTGFQKPTRLPDFVNAYQYAS 203

Query: 231 LFNEALANDGRQAIYTAADLDKYKNGTNPFTHPNVNWTDEILKATAPVSRQNLNLRGGSN 290
           L+NEAL+NDG    Y+   L+ ++ GT+P+ +P+VNW D++L+ +AP+S  NL   GGS+
Sbjct: 204 LYNEALSNDGLPLRYSDEQLEGHRTGTDPYLYPDVNWYDQVLQQSAPISDYNLTFSGGSD 263

Query: 291 KVRYFVDLDYLSQSGFLVTDPSINTYETNNSFKRYSFRSNIDVDLTNSTTLSLSLFGRIR 350
             RYF+ L YL   G            +N  F+R +FRSNIDV L+     SL   GRI 
Sbjct: 264 NARYFILLGYLQNQGLYANTDGDRKENSNAHFERVNFRSNIDVALSPKVAASLDFGGRIE 323

Query: 351 NSNQPGSTIASIYSTLLTTPNNAYPKFNENGSLGGNTEFQNNLYGMSIKSGYRPSVNRNL 410
           +   P    A+++  +   P  A+P  N +GS GG T + +N     +  GY  S +RN+
Sbjct: 324 DRYFPNYNGAALWENMARYPAGAFPVRNPDGSWGGTTIYPDNPVASVLGRGYTSSHDRNI 383

Query: 411 GADVSLMQKLDTFLPGLYASGAISFNSYYNENINRSKSFAVYSPVINPVTNQTSYKTIGG 470
            A++ L + L  F+PGL  S A+  N+++  N NR+++ A Y  +    T    Y   G 
Sbjct: 384 MANLRLSEDLGDFVPGLRFSQALGINNWHRGNYNRTRNLAFYELLPGEGTEDYRYIQRGL 443

Query: 471 DGTQSNSSSPTDLNQQIFSRFDLGYDKTIDKNTFKAQLLFIRDSYVLGG-ALSQVNQSLG 529
           D   +   S  D   ++  +  L Y K  D +   A L++ +D   +GG  +    Q L 
Sbjct: 444 DTGFTVDESGNDQWNRLSVQLGLDYRKNWDSSDLLAMLMYHQDVLFVGGNNVPYAQQRLM 503

Query: 530 GRFNYDYDNKYLLELATSYMGYDRYKAGDQWGFFPSVGLGWNIASESFFANLKNTVNSLK 589
           GR +Y   + Y  ELA SY G +R++ G ++GFFP++   W +AS   F    N +  LK
Sbjct: 504 GRLSYGVKDTYFTELAFSYSGSERFEKGSRFGFFPALSAAW-LASNEDFLKGNNVLTFLK 562

Query: 590 LRTSYGLTATNAAAG-YFQYLQNFDNGDTFYSRNPLTTSSTKDEGPLANPNITWEKAKKF 648
            R S GL   +   G  F Y Q+F     +       +  T  EGPLANP+I WEK  KF
Sbjct: 563 ARASVGLAGNDQFGGSRFAYTQDFYYSGDYRLGADNNSIGTIVEGPLANPDIGWEKDLKF 622

Query: 649 NIGLDVSMLKDKVWLTADYYRNSYYDLLQTRRTNASAVIGAVLPPENIGKNQYSGIELGL 708
           N GLD   L  K+ ++ D + N   ++           +G   P  N G     G E+ L
Sbjct: 623 NFGLD-GQLFQKLDVSLDLFYNRRNNIPIDGSNIFPGYLGVTAPYLNFGTVHNRGFEVNL 681

Query: 709 GYQNQINNFRYFITANGSWSASKVIFNDEPFRKNAYEYRTGQPVGQTFGYVADGFY---- 764
            Y    +N  Y++  + S++ +K++   E     +Y  RTG P+GQ FG+++DGFY    
Sbjct: 682 LYNGDFHNGGYYLGGSVSYAKNKIMDMQEMTYPESYMQRTGHPIGQPFGWLSDGFYQEDD 741

Query: 765 -NNTAEINNGPKVDGYLPV-PGDLKYKDLNNDGIINTYDMTAIGST-KPVFFYGLTGGIN 821
            N    + +G     + P  PGD+KY+DLN DG ++  D T+IG+  +P   Y  T G+N
Sbjct: 742 FNADGSLRDGVVSSAFAPARPGDIKYRDLNGDGTVDQNDETSIGNPWQPKVNYSFTLGMN 801

Query: 822 YKGLDFSFTLNGKANRNVYFNFINFASTGAAGGYGQALESSLLRWTPATASQAEYPRLSV 881
           YKG D      G A R+V  N   F +       G    ++L RWTP TA  A YPRL+ 
Sbjct: 802 YKGFDLEALFYGLAGRDVALNGTYFWALQDDANIG---VNALGRWTPETAGSATYPRLTT 858

Query: 882 GNNPNNSQVSSFWVKNGNYLRLRNVEIGYSLPGHLIKLIGLTNVRVFANGLNLLTATTLD 941
            ++P+N + S FW ++GN LRLRNVE+GY+ P  L + I +  VRVFAN +N+LT   ++
Sbjct: 859 LSDPHNYRPSDFWQESGNVLRLRNVELGYTFPESLTEKISVDRVRVFANAVNMLTWDKME 918

Query: 942 GVDPEVLIGNVPNQRIFNFGVNLQF 966
            VDPE   G  P  + FN G+++QF
Sbjct: 919 MVDPE-SYGGYPPLKSFNLGLSVQF 942