Pairwise Alignments

Query, 966 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1132 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  401 bits (1030), Expect = e-115
 Identities = 266/906 (29%), Positives = 438/906 (48%), Gaps = 43/906 (4%)

Query: 82   VPVLFGTQKNVKRIQSSATVSGEELKSFPTPQVGLMLYGKLPGLYVVQNNFQLGSDEPAI 141
            V V FG QK +    + +TV+ +++KS PT  +   L G +PG+  +  + Q G +    
Sbjct: 208  VVVGFGEQKKISLTGAVSTVNVDDMKSNPTSSLSNALAGNVPGVMGMMQSGQPGKNISEF 267

Query: 142  SLRG-------RTPLVVIDGVPRSYLSIDPEQIESISVIKDALGTALYGMKAADGMLLIT 194
             +RG         PLV++D + R    ++ E I+SI+V+KDA  TA+YG + A+G++LIT
Sbjct: 268  WIRGISTFGGGTNPLVLVDNIERDLNELNIEDIQSITVLKDAAETAMYGSRGANGVILIT 327

Query: 195  TKRGANMPKQITFTSQYGIQQQIERPKFLDAFNYATLFNEALANDGRQAIYTAADLDKYK 254
            TKRG+     + F  ++    +   P+F D   YA+L NE+        IY   +L+  +
Sbjct: 328  TKRGSAGKIDVNFKDEFIYNTRTITPEFEDGVTYASLLNESRITRNEGPIYQPEELEILR 387

Query: 255  NGTNPFTHPNVNWTDEILKATAPVSRQNLNLRGGSNKVRYFVDLDYLSQSGFLVTDPSI- 313
             G +P  +PNV+W + +L+  A   R NLN+ GG    RY+    Y+++ G    D S+ 
Sbjct: 388  LGLDPDLYPNVDWKNLLLRDGAMTYRANLNMSGGGPTSRYYASGSYINEGGMYEIDQSLK 447

Query: 314  NTYETNNSFKRYSFRSNIDVDLTNSTTLSLSLFGRIRNSNQPGSTIASIYSTLLTTPNNA 373
            + Y TN ++KR+++R N D +LT +T + + + G +   N PG      +  L       
Sbjct: 448  DDYNTNANYKRWNYRLNADFNLTETTEVKIGVAGSLSKRNSPGLGDVDFWGALFGYSPIR 507

Query: 374  YPKFNENGSLGG-NTEFQNNLYGMSIKSGYRPSVNRNLGADVSLMQKLDTFLPGLYASGA 432
             P    NG +    T  Q N + M+ ++G+  +    +  ++++ Q L     GL   G 
Sbjct: 508  TPVLYSNGYVPAVGTGNQTNPWVMATQTGFNENWVNKVQTNITVEQDLGFVTEGLRVRGI 567

Query: 433  ISFNSYYNENINRSKSFAVYSPVINPVTNQTSYKTIGGDGTQSNSSSPTDLNQQIFSRFD 492
            + ++     NI R K    +        N     T   + ++   SS +  N+  F    
Sbjct: 568  VGYDILNTNNIQRRKWPEQWQAARARDVNGDLVFTHISNPSEMQQSSTSSGNRLEFYDLM 627

Query: 493  LGYDKTIDKNTFKAQLLFIRDSYV----LGG----ALSQVNQSLGGRFNYDYDNKYLLEL 544
            + Y++ I  +       F RD+YV    LGG     +++ NQ++ GR  Y++  +Y +  
Sbjct: 628  INYNRDIGDHHVGGATRFTRDAYVQTVNLGGDIKNGIARKNQAIAGRLTYNWLYRYFVNF 687

Query: 545  ATSYMGYDRYKAGDQWGFFPSVGLGWNIASESFFANLKNTVNSLKLRTSYGLTATNAAAG 604
               Y G + +  G+Q+GFFP+V   WNIA E+F  N    +N  K+R SYG    +   G
Sbjct: 688  NFGYTGSENFAPGEQYGFFPAVSFAWNIADENFVKNNIGWLNLFKVRYSYGKAGNDQLMG 747

Query: 605  --YFQYLQNF-----DNGDTFYSRNPLTTSSTKDEG-----PLANPNITWEKAKKFNIGL 652
               F YL        D+G+           S +  G      +A+P +TWE A K N+G 
Sbjct: 748  GERFPYLYTISEITNDDGEPVGGYQWADYGSDRYFGGMMYSQVASPYVTWEVATKQNLGF 807

Query: 653  DVSMLKDKVWLTADYYRNSYYDLLQTRRTNASAVIGAVLPPENIGKNQYSGIELGLGYQN 712
            D+    + +    D++      +   R    + V     P  N+G  +  G++    Y  
Sbjct: 808  DIE--TNHITANIDFFDEERTGIYMPREYLPAMVGLESTPRANVGIVKSRGLDGRFKYIQ 865

Query: 713  QINNFRYFITANGSWSASKVIFNDEPFRKNAYEYRTGQPVGQTFGYVADGFYNNTAEINN 772
            Q+        +N ++S ++++  DE      Y+   G  VGQ+ G VA G + +  +I N
Sbjct: 866  QVGQVTLTARSNITYSKNEIVEKDEENNVYPYQNEEGFRVGQSRGLVALGLFEDYDDIRN 925

Query: 773  GPKVDGYLPVPGDLKYKDLNNDGIINTYDMTAIGST-KPVFFYGLTGGINYKGLDFSFTL 831
             P     +  PGD+KYKD+N DG+IN  D  AIG+T +P   YG+    N+KG +     
Sbjct: 926  SPTQTFGVYQPGDIKYKDVNGDGVINDGDRVAIGATRRPNLIYGIGASANWKGFNIGVHF 985

Query: 832  NGKANRNVYFNFINFASTGAAGGYGQALESSL--LRWTPATASQ--------AEYPRLSV 881
             G A ++ +  +       + G +GQ ++  +   RW  A  S+        A YPRLS 
Sbjct: 986  QG-AGKSTFSTYGKTVHAFSEGEWGQVMKGVMGDDRWISADISEDPSTENPNASYPRLSY 1044

Query: 882  GNNPNNSQVSSFWVKNGNYLRLRNVEIGYSLPGHLIKLIGLTNVRVFANGLNLLTATTLD 941
            G NPNN + S+FW+++G YLRL+ V+IGYSLP  + +L+   N+R++  G NL T +   
Sbjct: 1045 GPNPNNFRESTFWLRDGRYLRLKTVDIGYSLPKKISRLVRADNIRLYVVGTNLFTWSKFK 1104

Query: 942  GVDPEV 947
              DPE+
Sbjct: 1105 LWDPEL 1110