Pairwise Alignments

Query, 678 a.a., ligand-gated channel protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 790 a.a., Outer membrane receptor proteins, mostly Fe transport from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 71.2 bits (173), Expect = 2e-16
 Identities = 143/688 (20%), Positives = 260/688 (37%), Gaps = 104/688 (15%)

Query: 64  VQILSADELKRINSLSVADAIRYLSGVQLKDYGGIGGMKTVNVRSLGTNHTAVFLDGIQI 123
           V ++ A +L   N L +  A+  +SG+++++ GG+G    +++         VF+DGI +
Sbjct: 129 VDVIDAKKLYNTN-LDLGHALDRVSGIRVRESGGVGSNMNLSLNGFTGRQVKVFIDGIPM 187

Query: 124 GNAQNGQVDLGKFSLNNLEEIALYSGQKPELLIPAKGYASASSIYLKTKDPDFEKSQKQK 183
            N       L    +N  E I +Y G  P   +     A   +I + T+     KS K  
Sbjct: 188 DNF-GSSFQLNNIPINLAERIEVYKGVVP---VSLGADALGGAINIVTR-----KSVKSY 238

Query: 184 IELGLKNGSFGLINPSLVYLYKINEKLKASINTEYIHADGKYKFRYTNGVFDTTAVRNNG 243
           ++     GSF     ++   Y         +N    ++D  YK        +T       
Sbjct: 239 LDASYSYGSFNTHRTAINAGYVAPSGFTIEMNAFQNYSDNDYKVTVDVADINTGQYYPQQ 298

Query: 244 NVERFRLQ-------------------AALFGKFNGGKWH-----AQAYSFLSDRGLPGA 279
            V+RF  Q                     LFG   G  +      A+  S   D    G 
Sbjct: 299 TVKRFNDQYHNETLITQLGVQNKPYADRLLFGITLGKMYKEIQTGARLVSVFGDWHRKGD 358

Query: 280 IVANRFDFTQ-RIWDRDFFIQGNAEKNLSNKFTI-LVNGKYAYVYQRYLDPDYVTTTG-- 335
           I+     + +  ++ +   +  NA  N   +  I  V+ +Y + +Q+Y +  Y T  G  
Sbjct: 359 IIMPTLKYQKDNLFTKGLNVSLNANYNFGTEQNIDTVHRRYNW-FQQYRE--YDTPGGER 415

Query: 336 -FLDNRFKEQEAYLSVAAKYKISSVWEAAYASDYTFQTLDANIYRFP-----YPTRNTFL 389
            +   +++      + +A Y I+ V   + ++ +       N   FP        R T  
Sbjct: 416 SYSMYKYQNNNTVAAFSADYAINDVHTLSLSNTFNSFNRQGNDPLFPDQDRYQQPRETMK 475

Query: 390 NVLSSSFIFKQLNIQANLLSTTVVDRVKLYSSTGNKQVFSPT------------------ 431
           N+L   + +     Q N  ++  V   + + S    + ++PT                  
Sbjct: 476 NILGLGYRY-----QPNSNASISVFGKQYHQSNYYAKAYNPTGNYGDVAYVNTRDNFDYW 530

Query: 432 -VMLSWKLLKDQDIRVRAFYKDIFRMPTFNDLYYTFI---GNTLLNPEYTKQYDVGVTYF 487
              L+     + +++++A  +  +R+P   +LY   +   GN  L PE +  Y++G+ Y 
Sbjct: 531 GYGLAATYFLNPNVQLKASAEKTYRLPEPEELYGDMVNLEGNIGLRPESSYNYNMGIFY- 589

Query: 488 KNFKNQEIKFIDIQSDVYYNRIKDKIVAQPGANLYRWIMYNIGLVDIRGLELNAKTAFEP 547
            N      + + + ++  Y   KD I  +   N    +M N+  V   G E++ +  +  
Sbjct: 590 -NHAWTVDRRLQVDANFLYRDAKDFIRPRLNTNQAMQVMDNLVNVTNAGFEMDVR--YFH 646

Query: 548 LSNFIINIGINYTYQKAVDVTSKLEE-------TYQDQIPYIP---ENSGSFLTWLDYHQ 597
             NF    G N TYQ   + T + +E        Y+D+IP +P    N+ +  T  D   
Sbjct: 647 GQNF--TAGANLTYQNLRNNT-RFDEGQTVESVVYRDRIPNMPYLFGNANASYTINDVLG 703

Query: 598 WHAN----YGFIYTG--FRYNQKANNIYNYMEPWYTHDAAIGYEFKLKNGSIGINGEVNN 651
              N    Y  +Y    + Y     +    +    +HD  + Y F  K        E  N
Sbjct: 704 AQKNLVIGYNLLYVHAFYLYWPSLGSDKLDIPKQLSHDLNVTYTFG-KQQRFQFTAECRN 762

Query: 652 LL-NQYYDIIPNFPM--PGRNYRLTLNY 676
           +L ++ YD   NF +  PGRN+   + Y
Sbjct: 763 ILDSKLYD---NFSLQKPGRNFSGKIRY 787