Pairwise Alignments

Query, 666 a.a., RagB/SusD family nutrient uptake outer membrane protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 472 a.a., RagB/SusD family nutrient uptake outer membrane protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  105 bits (262), Expect = 5e-27
 Identities = 117/447 (26%), Positives = 198/447 (44%), Gaps = 73/447 (16%)

Query: 17  SCKKFLATVPTDNLLPE-EYYDSEAKLLNALAGVYYPLET-SALYGNFLSSDYNISDEAF 74
           SCKK    VP     P   ++ ++   L  +  +Y  L +   +  N ++ +   SDEA 
Sbjct: 6   SCKKDFLNVPPQGQQPSVTFWKTQDDALKGVNAIYAQLRSWDNVAFNAIAIESTGSDEA- 64

Query: 75  YQRSAQTTGVSVYN-FDY-----SDASVAALWQQCYVGIERANMLIANINVANIAENKRA 128
             + +  T  + +N FD      +  S+   W   Y  I   N ++ N+    +  + +A
Sbjct: 65  -DKGSTPTDATFFNLFDQFTVTSTQGSLQGFWTGQYQNINLCNQVLDNVPNIGMDASLKA 123

Query: 129 PILGEALFLRGYYYFLLASNYGDVPLKTLPTKSPSAEDVQVPRTPLKQVYAQILEDMTKA 188
            IL EA F+R Y YF L   YG+VPL+    K  S  +  +P++    VYAQI +D+T A
Sbjct: 124 RILAEAKFIRAYSYFRLVRAYGNVPLRLTVPKDNS--EYNIPQSDKAVVYAQIEKDLTDA 181

Query: 189 EGLTSKITDLGFSGRVSKTTVEGILARVCLTMAGAPLKDESKYADAKAWALKVKESGEHR 248
             +  +       GR +K    G+ A+V +         + K+AD  A   +V   G + 
Sbjct: 182 AAVLPQSYASTDLGRATKGAALGMKAKVAMY--------QKKWADVLALTNQVMTLG-YD 232

Query: 249 LNPSYKQLFVNMHQDLYDIKDSMWEVEFKGNGADGLGSNGRVGSLGGIQMQVATGIGLKI 308
           L P +++ F   +++     +S++EV+     A+ L SN    +    Q+Q   G+    
Sbjct: 233 LFPDFEKGFRVANENSV---ESIFEVQ-----AELLPSNSAASNSQYSQVQGVAGV---- 280

Query: 309 GYSYGFLHTTAKLFNLFQPGDLRRDWNL-------AQFNYIAT------YPDRYYYNYYT 355
              +GF   +A+L   F+ GD R+D  +        Q + + T      Y  + Y  + T
Sbjct: 281 -MGWGFNTPSAELEAAFETGDPRKDATILFRGETTPQGDLVPTTVPNARYNQKSYVPFNT 339

Query: 356 AAQIYNRDAAKFRREAYVLDNKNQNTTPINYPLLRYSDVLLMLAEAENHLNGPTALAYDA 415
               +N  A +                  N  +LR+SD+LLM AEA N L G  A A  +
Sbjct: 340 RVSGFNEGAQQ------------------NIRVLRFSDILLMNAEAANEL-GNNAQALTS 380

Query: 416 INQVRRRGYGVDAATAGATVSVVNNMT 442
           +N+VR+R         GA+V+++ ++T
Sbjct: 381 LNRVRKR-------ARGASVTILPDVT 400