Pairwise Alignments

Query, 666 a.a., RagB/SusD family nutrient uptake outer membrane protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 627 a.a., RagB/SusD family nutrient uptake outer membrane protein from Mucilaginibacter yixingensis YX-36 DSM 26809

 Score =  140 bits (353), Expect = 2e-37
 Identities = 128/466 (27%), Positives = 209/466 (44%), Gaps = 61/466 (13%)

Query: 2   KKILYFLLIISTGLGSCKKFLATVPTDNLLPEEYYDSEAKLLNALAGVYYPLETSALYGN 61
           K I+   +++S  L SCKK+L       L  ++ ++  +   + + G+Y  L  S  YGN
Sbjct: 7   KYIIGAAMVVSAALPSCKKYLDYQSPAKLNTDQAFEDPSYTNSVIIGIYTKLCGSNAYGN 66

Query: 62  FLSSDYNI-SDEAFYQRSAQTTG-----VSVYNFDYSDASVAALWQQCYVGIERANMLIA 115
            LS  +++ +DE  YQ S          +  Y  + ++ S+  ++ Q Y G+ERAN+   
Sbjct: 67  QLSVYWHLGTDEFTYQASTSFDSGNDYAIPNYGAEKTNTSLQNVFNQLYAGVERANIACK 126

Query: 116 NINVANIAEN-------KRAPILGEALFLRGYYYFLLASNYGDVPLKTLPTKSPSAEDVQ 168
            I  +N+ +N       K     GEAL LR  YY+ L  N+GDVP   +P+    ++ ++
Sbjct: 127 FIPASNVYKNGNSTDKTKMQIYYGEALALRAQYYYELIRNWGDVPATFVPSADLPSQFLK 186

Query: 169 VPRTPLKQVYAQILEDMTKAEGLT---SKITDLGFSGRVSKTTVEGILARVCLTMAGAPL 225
                       I+ D+  AE L      + D G   R +K  ++G+ AR+ L   G  L
Sbjct: 187 --NANRDSTLDHIIADLKTAEDLVPWRDALPDYG-DFRFTKGAIKGLRARIALARGGYSL 243

Query: 226 KDESKYADAKAWALK-----------VKESGEHRLNPSYKQLFVNMHQD---LYDIKDSM 271
           ++++K  + +A  LK           V  S +H LNP Y+ +F  +H     + D  + M
Sbjct: 244 RNDTKLMERRADYLKYYQIAYDETLDVINSKKHGLNPVYENIFKTLHSGTGRMDDAHELM 303

Query: 272 WEVEFKG--NGADGLGSNGRV-------GSLGGIQMQVATGIGLKIGYSYGFLHTTAKLF 322
           +EV   G  N ++   +NG         G  GG      T       Y Y F +T     
Sbjct: 304 FEVAMWGQINDSNLASANGMTFSNSPSWGGAGGRSTAQPT-------YYYEFDNTGK--- 353

Query: 323 NLFQPGDLRRDWNLAQFNYIATYPDRYYYNYYTAAQIYNRDAAKFRREAYVLDNKNQNTT 382
                 D+RRD  LAQ+    +  +    N        N +  KFR+     +     T 
Sbjct: 354 ------DVRRDVTLAQYKVQNSTDNTS--NVKNPLSSINFNVGKFRKSWTAFNGTVTGTY 405

Query: 383 PINYPLLRYSDVLLMLAEAENHLNGPTALA-YDAINQVRRRGYGVD 427
            +N+P+LRY+D+LLM AEA N L    +++   A+  V++R YG +
Sbjct: 406 GVNWPILRYADILLMYAEAANELGKAGSISPLQALQLVQQRAYGAN 451



 Score = 30.0 bits (66), Expect = 3e-04
 Identities = 20/48 (41%), Positives = 22/48 (45%), Gaps = 5/48 (10%)

Query: 561 RATATATIATTAVDLSGLSQSSFQQAIEDERSRELCFEALRKPDLIRW 608
           RA    TI  T  D  G     F  A+  ER  E   E +RK DLIRW
Sbjct: 446 RAYGANTIPVTPTDHDG-----FFNAVVHERLLEFGGEGIRKYDLIRW 488