Pairwise Alignments

Query, 666 a.a., RagB/SusD family nutrient uptake outer membrane protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 588 a.a., SusD family protein from Bacteroides ovatus ATCC 8483

 Score = 97.8 bits (242), Expect = 1e-24
 Identities = 73/225 (32%), Positives = 112/225 (49%), Gaps = 12/225 (5%)

Query: 8   LLIISTGLGSCKKFLATVPTDNLLPEEYYDSEAKLLNALAGVYYPL-ETSALYGNF---L 63
           LL+    + SC+  +   P D ++PE+  DS+      + GVY  L E    YG+F   L
Sbjct: 16  LLLSGAVMTSCESMIEEKPFDFIVPEDVEDSDNGADMWVTGVYNTLHEAMFRYGSFPRPL 75

Query: 64  SSDYNISDEAFYQRSAQTTGVSVYNFDYSDASVAALWQQCYVGIERANMLIANIN-VANI 122
             D +    A +Q S   +G    NF   D     LW   Y  I RAN+ ++ IN + N+
Sbjct: 76  DYDCDYISGAVWQFSQFGSG----NFQGGDGQADVLWTGMYSLINRANIAVSEINKMQNV 131

Query: 123 AENKRAPILGEALFLRGYYYFLLASNYGDVPLKTLPTKSPSAEDVQVPRTPLKQVYAQIL 182
           +E  +   LGE  FL+ + YF L   YG +P+ ++ + + S +    PR P+ QVY + +
Sbjct: 132 SEEFKKNALGECYFLKAWAYFYLVRAYGAIPIYSV-SVNESGQYTNNPRIPIAQVYTETI 190

Query: 183 EDMTK-AEGLTSKITDLGFS-GRVSKTTVEGILARVCLTMAGAPL 225
             + K A+ +  K TD GF  GRV   T  G+LA+V  T+  A +
Sbjct: 191 IPLLKDAKDMIYKNTDNGFKPGRVCAATAAGLLAKVYATIGSASM 235



 Score = 62.4 bits (150), Expect = 6e-14
 Identities = 41/108 (37%), Positives = 55/108 (50%), Gaps = 16/108 (14%)

Query: 560 TRATATATIATTAVDLSGLSQSSFQQAIEDERSRELCFEALRKPDLIRWGKWVETMNSIG 619
           TR+ AT        D     ++S + AI +ER+ EL  E  R+ DLIRWG +++ MN++G
Sbjct: 495 TRSNATGKELANFTD-----KTSLRSAILEERAMELALEGDRRWDLIRWGIYLQAMNALG 549

Query: 620 AEIRANAGATFSYGGLAGSNVLSKHQLFPIPAAEITVNKQATQ-NPGW 666
               AN     S          SKH LFPIP  EI  N+   + NPGW
Sbjct: 550 GMDEANNVKQRS----------SKHLLFPIPTLEILTNQGINENNPGW 587



 Score = 56.2 bits (134), Expect = 4e-12
 Identities = 28/59 (47%), Positives = 35/59 (59%)

Query: 376 NKNQNTTPINYPLLRYSDVLLMLAEAENHLNGPTALAYDAINQVRRRGYGVDAATAGAT 434
           ++ Q  T  NYP LRY+DV+L+ AEA N LNGPT  + DA+N VR R        A  T
Sbjct: 450 DQTQPRTDANYPFLRYADVVLIFAEAANELNGPTKESVDALNDVRTRSNATGKELANFT 508