Pairwise Alignments

Query, 191 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 185 a.a., RNA polymerase sigma-70 factor, Bacteroides expansion family 1 from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 82.0 bits (201), Expect = 6e-21
 Identities = 51/164 (31%), Positives = 89/164 (54%), Gaps = 5/164 (3%)

Query: 18  LKESNHTAFEELYNRYWKKTLSLAVHKSGDLNEAENIVQDIFVSLWNRREVLVINTSFNN 77
           LK+     F+ LY+RY+K  ++ A     D +EAE++VQ++F+  W   E   +  + + 
Sbjct: 12  LKKKTEEGFDYLYHRYYKNLVNYAFTFLLDSSEAEDLVQNLFIHFWENLESFQLKGTLDG 71

Query: 78  YLFVSVKYRVIKFLDKLRSIRIYQEN--MAVSADVLDDSTQQYLDFEELRDRLEKLICAL 135
           + + SVK R    L+KL+SI +Y ++  + + A ++  S ++ +D   L + L   I  L
Sbjct: 72  FFYTSVKNRC---LNKLKSIDVYDKHKILYIEAMLVHLSREEEIDKNVLEEELLMAISNL 128

Query: 136 PEKTSLIYRMNKDEGMSHREIAQSLNMTEKAVNSQLVRTKKILR 179
           P +   I  +   +G    EIA++LN++E  V +QL R K  LR
Sbjct: 129 PVQAREIIVLKYFKGQKIAEIAETLNLSENTVKTQLKRGKSKLR 172