Pairwise Alignments

Query, 513 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 498 a.a., RagB/SusD family nutrient uptake outer membrane protein from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 81.3 bits (199), Expect = 8e-20
 Identities = 126/499 (25%), Positives = 202/499 (40%), Gaps = 72/499 (14%)

Query: 1   MKNIKYIILFAALVFTTAGCKK-FLNVTPIEAQSGNNFWKTREEVEGFTNGIYARLRSKV 59
           +K+I Y  L AA +   + C K FL + P   Q  +NF++  E+V      +Y  L+   
Sbjct: 3   LKHILYPTLLAAGLAGFSSCDKDFLELQPKGTQLESNFYQNEEQVYQALVAVYDVLQWGT 62

Query: 60  AGTPQFFNGDDRAFFPALEIRGNSINVLSIDGDGANTFNALIGNNMKFIVSRGNRYDNLM 119
           +G             P L +  +       D     ++ A     +   ++  +      
Sbjct: 63  SGGYTMKQ-------PLLTVASDEAYAGGSDASDQPSWVAWDNFTLDPYITPSSGL---- 111

Query: 120 KKIMSWKEWYDVIAASNIMYFEIDKVPSSSLQDADRRRYKAEAVFLRNLSYMFICKLFGD 179
                W++ Y  +  +N++  +I++VP   L +  + R  AE   LR   Y  + + FG+
Sbjct: 112 -----WQKSYSGVYRANLLLSKIEQVPG--LSEPVKARVVAETKALRAYFYFDLVRFFGN 164

Query: 180 AVYYTEAYHSTPLARTPQVE---VMKKCIADMTAAKADLPTTYNDVSSNGFRPTKATAVA 236
               TE   ++ L   PQ +   V  +   D+  A+A LPTT        F  ++ TA A
Sbjct: 165 VPLITEPIPNSELYTQPQAKPDAVYAQIEQDLNDARAALPTTIPAGEKGRF--SRYTATA 222

Query: 237 LLMHLNMWAAAWDNENKTKYYEAVKTLATELDTYTNYKLLP-----------ITSENTLK 285
           +L  + MW       N  +  EA + L  E++T   Y L               SE+ L+
Sbjct: 223 ILGKVIMW-----QNNNARMAEAAQ-LFNEVNTSGVYALQESYEDVFRPDNAFNSESILE 276

Query: 286 IFKGRSSENLFGILQDFNYGEG-----FSLPAGFS--YYFSHYPYRGTVTKTASSMAYNK 338
           I    SS+  +G     N GEG     F  PA +S   +   + +     +   +M  + 
Sbjct: 277 I--PHSSKAAWGDWNWVNGGEGNVAPQFVGPADYSGPTFTGGWGFAPVSLELVEAMEGDP 334

Query: 339 DYI------SKLYPAGIPDARLTNWFENYDSGTGTFQFKKFANI--YTTGSGSAISVTSD 390
            +        KL   G   A     ++N D     +  +K+A +  Y +  G+   +   
Sbjct: 335 RFEYTIIDGKKLKEEG---ATYNTRYQNTD-----YFIRKYAPLAAYRSTVGTP-ELNWP 385

Query: 391 DSAIIFRLPDCYLLTAEALAELG-DEGGARDFTNRVREAAAAPPIVLSGQDLKDEIYRER 449
            + I  RL D YLL AEAL   G D   A++  N VR      P+    +   + IYRER
Sbjct: 386 INEIEIRLADTYLLEAEALVRSGGDTNRAKELLNAVRARVGLAPV----EPTLENIYRER 441

Query: 450 CRELIGEGQFFFDLVRTKR 468
             EL  EG  +FDLVRT R
Sbjct: 442 RLELATEGHRYFDLVRTGR 460