Pairwise Alignments

Query, 513 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 471 a.a., RagB/SusD family nutrient uptake outer membrane protein from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 76.6 bits (187), Expect = 2e-18
 Identities = 129/543 (23%), Positives = 200/543 (36%), Gaps = 118/543 (21%)

Query: 3   NIKYIILFAALVFTTAGCKKFLNVTPIEAQSGNNFWKTREEVEGFTNGIYARLRSKVAGT 62
           NI   +LF  +VF+T  C   +   PIE+ S +  + + E +E    GIY   ++     
Sbjct: 8   NIVASLLFGTMVFSTVSCD-VIEKEPIESLSPDAVFSSPERIEKAVIGIYDDNQN----- 61

Query: 63  PQFFNGDDRAFFPALEIRGNSINVLSIDGDGANTFNALIGNNMKFIVSRGNRYDNLMKKI 122
           P F  G  RA   A +IRG   +  S  G G   FN L  +                  +
Sbjct: 62  PSFLGG--RALVYA-DIRGGDTDPASYFG-GVGLFNTLSNDGTV---------------M 102

Query: 123 MSWKEWYDVIAASNIMYFEIDKVPSSSLQDADRRRYKAEAVFLRNLSYMFICKLFGDAVY 182
            +W   Y  I  +N+    +++  S     A   +Y+AEA F+R L++ ++  LF     
Sbjct: 103 AAWTGGYRAIYTANLFLQALEENRSKVATVALANQYEAEAKFVRALNHWYLINLFAQPYN 162

Query: 183 YT-EAYH------------------STPLARTPQVEVMKKCIADMTAAKADLPTTYNDVS 223
           +T +A H                     L+R+   EV  +   D+   + +LP T     
Sbjct: 163 FTSDASHLGIPVALKAFDASSAFAPEAQLSRSTVAEVYAQIEKDLLFGELNLPITQGTNF 222

Query: 224 SNGFRPTKATAVALLMHLNMWAAAWDNENKTKYYEAVKTLATELDTYTNYKLLPITSENT 283
           SN  R T+  A ALLM L ++    +N    +Y + V  L  +L+        PIT+   
Sbjct: 223 SNVARATRGAAQALLMRLYLYKG--ENTKVIEYADKVTALGYQLNA------APITAFRD 274

Query: 284 LKIFKGRSSENLFGILQDFNYGEGFSLPAGFSYY------FSHYPYRGTVTKTASSM--- 334
                  + E++F +  +       +   G  Y        S  PY    T   S +   
Sbjct: 275 Y-----LTKESIFSVAHNAADNPNTNSSIGNHYSPENRGDISISPYHAIATLADSDLRKS 329

Query: 335 AYNKDYISKLYPAGIPDARLTNWFENYDSGTGTFQFKKFANIYTTGSGSAISVTSDDSAI 394
                 + K++     DA  TNW                                     
Sbjct: 330 TLTTGKLGKVWTLKFTDA--TNWIP----------------------------------- 352

Query: 395 IFRLPDCYLLTAEALAELGD--EGGARDFTNRVREAAAAP----PIVLSGQDLKDEIYRE 448
           + R P+  L  AEALA         A +  N++R  A A     P   S ++L + I  E
Sbjct: 353 VVRYPEVILSKAEALARQSSAVNPEAIELINQLRRRAQASEFSVPDFASREELIETILLE 412

Query: 449 RCRELIGEGQFFFDLVRTKRVV--NSDFTKSPISVANLNAGAWTWPLTISADERSANPYL 506
           R  EL  EG   FD +R K+ +  +S +T  P        G+    L I   +  ANP L
Sbjct: 413 RRIELAFEGHGIFDRLRNKKDIPASSMYTVQPY-------GSNKTILPIPQVDVQANPNL 465

Query: 507 IGN 509
           + N
Sbjct: 466 VQN 468