Pairwise Alignments

Query, 1477 a.a., DNA polymerase III subunit alpha from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1133 a.a., DNA polymerase III subunit alpha from Fusobacterium nucleatum SB010

 Score =  660 bits (1702), Expect = 0.0
 Identities = 416/1222 (34%), Positives = 666/1222 (54%), Gaps = 116/1222 (9%)

Query: 261  FVHLHNHTQFSVLQSTISIPDLVKAAAAQKMPAVAMTDHANMMGAFHFVNNVLNHNKAAE 320
            FVHL+ HT++S+ +   SI + +  A    M ++A+TD+ANM                  
Sbjct: 5    FVHLNLHTEYSLSEGVNSIDNFLIKAKELGMTSLAVTDYANMF----------------- 47

Query: 321  AKNAAAIEAGERPTEVVMTPIVGVEFFVCNNHLDRTAKDNGYQMVLLAKNKKGYHNLAKM 380
                 A+E  ++  ++ + PI+G+E  V N       + N + + LLAKN  GY NL K+
Sbjct: 48   ----CAVEFYQKAKKMGIKPIIGLELPVFNKD-----EQNIFSLTLLAKNYNGYKNLVKL 98

Query: 381  SSIAYTKGFYYVPRIDREVIEQYKDDIIVLSGNLSGEISNKIL-NMGESQAEEALIWWKN 439
            +S  Y K      ++++E++++Y  D+I LS +++GEI   IL N  + +    +  +  
Sbjct: 99   ASELYKKNENRELKLNKEILKEYSQDLIALSSSINGEIGKAILTNSSDEKINSIINEYIE 158

Query: 440  MFG-DDFYVEVMRHNQEDEDRVNESLIALARKHAVKLVATNNTYYINKKDANAHDILLCV 498
            +F  ++FY+E+  +   +   +N+ L  LA  + ++LVATNN YY+++      DI++C+
Sbjct: 159  IFSKENFYLEIQANELTETKIINDKLYDLAEFYNLELVATNNVYYVDRDGYELQDIIICI 218

Query: 499  KDGEKQATPIGRGRGYRYGLPNQEYYFKSGDEMKSLFAD-LPEAIVNIKEIVDKIEIYKL 557
            + G K      R R       ++E Y KS DEMK    +   +AI N   I     +   
Sbjct: 219  QSGLKVKEK-NRKRAI-----SKELYLKSKDEMKRFLGEKFEKAIENTNHIASLCNVEIT 272

Query: 558  AREVLLPKFDIPEEFLVAEDEADGGKRGENKFLRHLTYEGAKKRYGV-LTPEVTERLDFE 616
               +  P +++P E+            G +++L+ + +   KK Y   LT ++ +RL++E
Sbjct: 273  FGNLQFPYYEVPSEY-----------SGMDEYLKTICHTNIKKLYKEDLTKDILDRLEYE 321

Query: 617  LQTIEKTGYPGYFLIVQDFIAEARRRDVSVGPGRGSAAGSVVAYCLWITNIDPIKYDLLF 676
            L  I K GY GYF++V DFI+ A+RR + VGPGRGSAAGS+VAYCL IT IDPI+Y+LLF
Sbjct: 322  LSVIIKMGYSGYFIVVWDFISYAKRRGIPVGPGRGSAAGSLVAYCLGITMIDPIRYNLLF 381

Query: 677  ERFLNPDRVSMPDIDIDFDDEGRGRVMEYVIGKYGSSQVAQIITYGTMAAKSSIRDTARV 736
            ERFLNP+R+SMPDIDID   E R  +++YV+ KYG  +VA IIT+G M A+++IRD  RV
Sbjct: 382  ERFLNPERISMPDIDIDICRERRDELIDYVVHKYGRDRVAHIITFGRMKARAAIRDIGRV 441

Query: 737  LDLPLFEADKIAKLIPNMKLAKIFTLDEKTLKEALRPDE-YERVVELKNLGGLKDLSAET 795
            LD+ L + DK+AKLI        F   EKTLKE +   + Y   +EL+          + 
Sbjct: 442  LDIDLKKIDKLAKLI------SPFQTLEKTLKENVEVAKLYTTDIELQ----------KV 485

Query: 796  IQQAQILEGSLRNTGIHACGVIITPSDITNFVPVSTAKDSDLYVTQFDNSVVESAGLLKM 855
            I  A  +E ++R+   HA G++IT  D+   VP+   +   +  TQ+    +E  GLLK+
Sbjct: 486  IDLAIRIENTVRHVSTHAAGILITKEDLDRTVPIYLDEKEGVIATQYQMKELEELGLLKI 545

Query: 856  DFLGLKTLTLIKDTVKLVKKRFGIDLDPDNFPIDDVLTYELFQRGETIGIFQYESPGMQK 915
            DFLGLK L+ I+ T+  +KK   ID+D    P+DD   +++   G++ G+FQ ES G++K
Sbjct: 546  DFLGLKNLSNIQRTIDYIKKYKNIDVDLYKIPLDDKKVFQMLSLGDSTGVFQLESAGIRK 605

Query: 916  YMKELKPTVFDDLIAMNALYRPGPME--YIPSFVRRKNGEEEIKYDLDACEEYLKETYGI 973
             MK LKP  F+D++A+ ALYRPGP++   +  F+ RKNG+E+I+Y     E  LKETYG+
Sbjct: 606  IMKRLKPDKFEDIVALLALYRPGPLQSGMVDDFINRKNGKEKIEYPHKNLEIILKETYGV 665

Query: 974  TVYQEQVMLLSQKLAGFTKGEADVLRKAMGKKQKDVLDKMKPKFVKQAAEKGHDATTLEK 1033
             +YQEQVM ++  +A ++ GEAD+LR+AMGKK   ++ + + KF+++A + G+     E+
Sbjct: 666  ILYQEQVMKIASYMADYSLGEADLLRRAMGKKNFAIMRENREKFIERAIKNGYTVEKSEE 725

Query: 1034 IWKDWEAFASYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMAAVLSNNMSDIKQVAFFMEE 1093
            I++  + FA Y FNKSHS  YA I+Y TAY K HYPA Y AAV+++ +S+   +A++  +
Sbjct: 726  IFELIDKFAGYGFNKSHSVAYAMISYWTAYFKVHYPAFYYAAVMTSEISETGDIAYYFND 785

Query: 1094 CRQMSVTVLGPDVNESDLKFSVNAKGEVRFGMSAVKGVGEKAVESIIEERLANGPYGNVY 1153
             ++  V V  P++N     F V   G + + ++A+K  G    + I+E+   NG Y  + 
Sbjct: 786  AKEHGVRVYSPNINSPSAYFEVKNDG-ITYSLAAIKNFGLTMAKKIVEDVKLNGKYTTLE 844

Query: 1154 DFAKRSNTRIVNKKAYESFVYSGAFDAFGGHRAQYFYIGPNDKMNGIEKIIKYANDFQNN 1213
            +F  R+    +NK+A E+ + SGA D   G+R         +K   I+K++ Y++     
Sbjct: 845  EFVFRNKKNGMNKRALEALILSGALDEIKGNR--------KEKFLSIDKVLDYSSKAPKT 896

Query: 1214 ESTSQASLFGGSKADLILEPSLPVSPEWALMDRLKYEKDAIGIFLSGHPLDNYKLELDKF 1273
            +   Q +LF G  A  I + +L +S ++ L ++L  EK+ +G +LS HPLD YK  +  F
Sbjct: 897  DEIQQMNLF-GEAAKTIDKFNLAISEDFTLDEKLNKEKEFLGFYLSSHPLDRYKDIILAF 955

Query: 1274 CTHGVKQLSIINKVRMGDNNEDILAEFEKLKNRELCVGGLVVTASQRITKTGKPFGTFVF 1333
                      INK          L+E +   N+ +   G +    + ITK  +    F  
Sbjct: 956  ---------KINK----------LSEIDLEGNQGVKTFGTITNLKKIITKKEEQMAMFNL 996

Query: 1334 EDYDDASEMALFGEDFLKFKSFLTEGYFLQIRGRV------GERFGKAGDWEFKITAINL 1387
              YD       F   + +F + + E   + I G++      GER  K       +  +  
Sbjct: 997  ICYDRTISCIAFPRVYERFITEIIEKKTVYIEGKIQIDNYKGERTSK-----LLVDKLVE 1051

Query: 1388 MSELRDKLAKSLTIQVPIERVNDQLMREIEAILADNKANSEQQNCQLNFAIFDREKEIML 1447
            + ++ +  AK L I   IE  +      ++ ++  NK  +     Q+ FAI +++ E  L
Sbjct: 1052 LDKIYEYPAKKLFIL--IEPEDSYRYSRLKNLINSNKGKT-----QITFAIKNKD-EKKL 1103

Query: 1448 DMPSKNLKINPSNKFLEQLLGL 1469
               +K +K+N   KF E L+ L
Sbjct: 1104 QTINKGVKLN--KKFFENLVEL 1123