Pairwise Alignments

Query, 1083 a.a., SusC/RagA family protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1028 a.a., SusC/RagA family TonB-linked outer membrane protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  500 bits (1288), Expect = e-145
 Identities = 348/1040 (33%), Positives = 524/1040 (50%), Gaps = 55/1040 (5%)

Query: 83   ILNNAVFNKPDRIITGIVKDSTGVTLPGVSVKVLGTQSGTITDGNGAYRIEVGADAILSF 142
            I+   VF +  R I G+V D    T+PGV+++V G++  T TD  G YRI+      L F
Sbjct: 3    IVGTQVFAQ-SRTIIGVVTDGQKQTIPGVTIQVKGSKIITQTDEEGRYRIQALPADQLVF 61

Query: 143  SMIGYRTKEVKVGENQVINMVLSEERSTLADVVVVGYGTQKKETLTGAITIVGLDKLSSR 202
            + +GY+ + V VG    IN+ L      L+DVVV+GYG+  +  L+ +I  V +      
Sbjct: 62   NYVGYQAETVSVGAKTTINITLKPSSIGLSDVVVIGYGSANRNDLSTSIASVKMSDFEKA 121

Query: 203  SLNSVGEVLAGKSPGVIVTNEGGDPTATPRINIRGAGGINGE-SVLYVIDGSIF--LGVP 259
             + S  E LAG+  GV V    G P A   I IRGAG I  + S LYVIDG         
Sbjct: 122  PVKSFEEALAGRVAGVQVAGSDGQPGAVSNIVIRGAGSITQDNSPLYVIDGFPMDNANNN 181

Query: 260  QLNPNDIESISVLKD-GASAIYGARASGGVILITTKKGKSGKMQISFDAKLGQQSAWRKL 318
             +NP+DIESI VLKD  A+AIYG+R + GVI I TK+GK+GK  ++++   G Q   +++
Sbjct: 182  SINPDDIESIDVLKDAAATAIYGSRGANGVIQIVTKRGKTGKPVVAYNGYYGLQENTKRI 241

Query: 319  EPLNAQQRAQVAATAAKNGGTT--ILPAFDASKYPDGQVTRTNWMDEVFRNGMVQDYNAA 376
              ++     ++A      G      +       Y   Q   T++ D++F+    Q+++ +
Sbjct: 242  AVMDPYNFVKLANELDPVGTAQGYFIEGRTLESYQGLQ--GTDYQDQLFKIAPYQNHSLS 299

Query: 377  INGGSEKSNYYLSFNYRNAEGIVLNTQTKRYNFRINTEHEVTNWLKVGENLSYSSTNGNG 436
            + GG++++ Y LS NY++ EGI++N+   R   R   +H V+  +K G N++YS T   G
Sbjct: 300  LRGGADQTKYSLSTNYQDQEGIIINSGFSRIQSRFTLDHNVSKKVKAGINVNYSYTQSYG 359

Query: 437  ANTSSDYTGALLSAI-----YYPTNGTPYNADGSF--AGLPGGQYAGDYGDIVNPVADLQ 489
                S    A ++ +     Y P  G+    D      GLP      DY    NP+ DL+
Sbjct: 360  GPIGSSNFSASINTLYSIWGYRPITGSLLPIDDQLYDPGLPAVNVYSDYR--ANPILDLK 417

Query: 490  RIDINNPVNVLVVNPYVNVKLIKGLTFRSNLSITKSDAAFKSFTPKRPEVGKPVLSNSLQ 549
                NN  N L  N YV  ++IKGL  +S   I+ ++A   +F      +G P  +  + 
Sbjct: 418  NRINNNKSNNLDANAYVEYEIIKGLKLKSTGGISIANARVNAFYGSNTALGGPYTAQKVN 477

Query: 550  ES--SSRSNDFLAEQVLSY-KATFGSHQLDLTGGYSFQKTKSNSLSASGAGFDDESPQYR 606
             S  ++  + +L E  L+Y K    +H L+   G+S Q  K+ S   S     +ES    
Sbjct: 478  GSIYNNTGSTWLNENTLTYAKKINNAHNLNAVIGFSNQFAKTGSAGFSATNVPNESLGLD 537

Query: 607  YL-VNATVIQPSVSGMSEQALSSLFVRANYNYKEKYLLSLIGRRDGSSLLSKNNRTKNYG 665
             L ++ +++  SV+  S   + S F R +Y+YK  YL +   R DGSS  +   +   + 
Sbjct: 538  ALDLSTSIVARSVN--STWGMQSFFTRVSYDYKSTYLFTASYRADGSSRFAPGEKWGYFP 595

Query: 666  SASAGWVVSKEDFLKDASWLNELKLRGSYGILGNLASLNASAVNPL-LSATQSY-FGQTP 723
            + SA W +  E FLKDA  L++ K+R SYG  GN    + + ++ L     QSY F   P
Sbjct: 596  AVSAAWKIKNESFLKDAKILSDAKIRTSYGETGNNRVSDFAYLSQLAFPLNQSYSFNNNP 655

Query: 724  TLQNGYVQTVLANKDLTWAESKQTNFGIDVAVL-GRLSLNADYFIKETNKMILTRSLPGT 782
               +  + T   N+ L W  S+QTN GID+  L  R+ L AD + K+T+ ++L   LP T
Sbjct: 656  PELSAMIGT-FGNEGLKWETSRQTNIGIDLGFLKQRMLLTADIYRKKTSDLLLNAQLPYT 714

Query: 783  AGLNTQTINAGIVKDKGIELGLTYNSDKNAAFTYSVNATLTKVNNKVQELAPGLENIAVG 842
             G +    N G +++ G+EL L   + +N  F ++ N  ++   NKV  LA   + +A  
Sbjct: 715  TGASNAFKNVGAMQNDGLELTLNTVNIQNKNFRWTTNFNISFNKNKVVSLAENQQYLATT 774

Query: 843  TNF---RNELAPLTIRVGQPLYSYYVLKTDGIFQSQAEADNYKNA---------KGTKIQ 890
              F    + + P    +GQ +   Y    DGI+Q  ++ D   N            +  +
Sbjct: 775  VGFDTRYSNIPPYISVLGQSVGQLYGHIFDGIYQ-YSDFDKMPNGAYALKSNIPTNSNAR 833

Query: 891  PNAKAGDFKFVDINGDGSIDGNDRYFAGSAYPDFTYGLSFNASYKNFDINIFAQGVQGNK 950
             N K GD KF DINGDG ++  DR   G   P    G S N +YKNFD+N+F Q   GN 
Sbjct: 834  ANIKPGDIKFKDINGDGVVNEQDRTIIGRGLPLHVGGFSNNFTYKNFDLNVFFQWSYGNN 893

Query: 951  LFNAVKRTTYSAS---GPSYNKLVGILDAWSPENPGGKVPIISTSDANGNFNA-SDFYIE 1006
            L NA  R  +  S    P  N+    +D WSP NP       +   A G  N  S   +E
Sbjct: 894  LINA-NRLMFEGSTSNNPFLNQFATYIDRWSPTNPSN-----TYYRAGGGINTYSSNVVE 947

Query: 1007 DGSYLRIRNVTLGYSLPKSLANKLKTGGVRIYATANNLFTITNYSGFDPEIGMDNN---- 1062
            DGSYLR++ V+LGY+  K L +K+K   +R+YA+A NLFT+TNYSG DPE+   N+    
Sbjct: 948  DGSYLRLKTVSLGYNFSKKLLDKIKLSSLRVYASAQNLFTMTNYSGPDPEVSTRNSVLTP 1007

Query: 1063 GLDVGRYPQARSFILGLSVN 1082
            G D   YP+ R+ + GL+ +
Sbjct: 1008 GFDFSAYPRPRTIVFGLNTS 1027