Pairwise Alignments

Query, 620 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 562 a.a., RagB/SusD family nutrient uptake outer membrane protein from Phocaeicola dorei CL03T12C01

 Score = 95.9 bits (237), Expect = 4e-24
 Identities = 139/556 (25%), Positives = 216/556 (38%), Gaps = 111/556 (19%)

Query: 4   LNQNKFILYIALIIALGSSCKKGLDYENTGAINPKNVWTDSVLIKSYLNDVYSGLMPGWP 63
           L   K  L    I  + + C   LD E   AI+  + WT        L   Y     GW 
Sbjct: 8   LGMTKACLCALAISLVTTGCSDLLDKEPPSAISDGSFWTGEGDAMLALTGCYR-FQTGWS 66

Query: 64  LGSGANADE--GINASGGN---LSGFQRGIVDLVANATNLN--------YTNIDKTNYFM 110
               A       ++ +GGN      F   +      ATN N        YT I K N F+
Sbjct: 67  HDDFATPQGLLYLDFAGGNGTEKENFSTLMASSNTVATNGNLRWYWGNAYTQIAKYNTFL 126

Query: 111 DQVRDLPESVINPNTKNRLIGEAKFWRAWTYWGMVSSVGGVPLILKTQNGNDVNSLKVAR 170
           + + D P   +  + K +   E K  RA+ +  +      VP+ LKT + ++ NS  +++
Sbjct: 127 ENITDCP---MEESKKEQWSAEVKCLRAYFFLNLAFYYKDVPMPLKTLSVDEANS--ISQ 181

Query: 171 SKTSECVAQIIKDLDEAAAVLPPNYSGVDYGRINRAAALGFKARVLLWYASPLFNPSNDQ 230
           +  +E  +Q+ KDL  A  +LP  YS  +YGR  R AA    +R+ L            Q
Sbjct: 182 TPQAEVYSQVEKDLKTAIDLLPVQYSSEEYGRFTRGAAKVLLSRLYL-----------AQ 230

Query: 231 VRWANAYNAAKAAVQAA----DAAG--------FGLFADY--KLIWYSRNKEHIMTR--- 273
            RW +A    ++ + +     D           F +  +Y  ++I+     + + T    
Sbjct: 231 ERWVDAATVLRSVIDSGIYELDRRNGEDSYEKLFQIGGEYSPEIIFCIMGIKDLYTNSRY 290

Query: 274 QYYYPDSYMNFNAIRPLPFTNGNTNTDQPILPLLIAYPKRDGSPMQFDKNQLSNAAYNQQ 333
           QY YP++              G  +   P   L+  Y   DG      K+  ++  Y++ 
Sbjct: 291 QYLYPEA------------AYGGWHQFSPYNELVKEYFCADG------KDIKTSEVYDE- 331

Query: 334 FLTDFYTNRDDRFYATIWCGGTVYPTPDVNTIGMTAPRSRTYWQAWTWKASATPSTVLPE 393
              D Y NRD R YA+I+        P + +   T      Y     +K + T  +    
Sbjct: 332 --NDPYVNRDLRLYASIF-------LPPLGSYEGTKYNDIIY---DCFKGANTADSY--- 376

Query: 394 KNTTLFSGISPLVQNGDENGVTGFFQRKGLDTLIDRAALVGVAAGAKSWFSP-MRYAELL 452
               LF+G  P               +KG D  I          G+   ++P MRYAE+L
Sbjct: 377 NKFALFNGYCP---------------KKGCDPSITN------NLGSTPTYTPIMRYAEVL 415

Query: 453 LMLAETANETG----NSNEAVTALSSIRKRAGIAAGVSGKYGITATSQPDLRTAIMNERQ 508
           L   E  NE+     + N     ++ IR R  +     G       +Q  +R A+  ER+
Sbjct: 416 LSYLEAVNESQPNAVDQNLLDLTINDIRDRVKLV----GIKKTDVATQELVREAVRKERR 471

Query: 509 VELAFEGFRFNDLRRW 524
           VELAFEG R+ D+ RW
Sbjct: 472 VELAFEGLRYYDVLRW 487