Pairwise Alignments

Query, 445 a.a., sigma-54-dependent Fis family transcriptional regulator from Pedobacter sp. GW460-11-11-14-LB5

Subject, 461 a.a., fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein (NCBI) from Escherichia coli BW25113

 Score =  340 bits (872), Expect = 6e-98
 Identities = 179/451 (39%), Positives = 288/451 (63%), Gaps = 14/451 (3%)

Query: 5   VLIIDDEKKICSLLSRIIELEGFKTLQANTGKEGLKLLKNNDVSIVISDVKLPDVNGVAL 64
           +LI+DDE  +  +LS    L+GF+T  AN G+  L L  +    +V+ D+++P+++G+  
Sbjct: 7   ILIVDDEDNVRRMLSTAFALQGFETHCANNGRTALHLFADIHPDVVLMDIRMPEMDGIKA 66

Query: 65  VKDIKAIKSYVEIINLTAYGTIADGVLAIKNGAFDYLVKGDDNDKIIPLLYKAMDKSNLQ 124
           +K++++ ++   +I +TAY  +   V A++ GAFDY++K  D D++  ++ +A+   +++
Sbjct: 67  LKEMRSHETRTPVILMTAYAEVETAVEALRCGAFDYVIKPFDLDELNLIVQRALQLQSMK 126

Query: 125 RRVSDLENKIAKKHSFQTIIGQSKSLMEAIDLAKKVSATDTTVLLLGETGTGKEVFAQSI 184
           + +  L   ++    +  I+  S ++M+      K++ +  +VL+ GE+GTGKE+ A++I
Sbjct: 127 KEIRHLHQALSTSWQWGHILTNSPAMMDICKDTAKIALSQASVLISGESGTGKELIARAI 186

Query: 185 HYESPRAAKPFVALNCSGFSPDLLESELFGYKAGAFTGANKDKKGLLEEANGGTLLLDEI 244
           HY S RA  PF+ +NC+     LLESELFG++ GAFTGA   ++GL E AN GTLLLDEI
Sbjct: 187 HYNSRRAKGPFIKVNCAALPESLLESELFGHEKGAFTGAQTLRQGLFERANEGTLLLDEI 246

Query: 245 GEMNLDLQAKLLRVLESQTFIKVGDTQTQQVNVRILAATNKDLKADAASGKFRSDLYYRL 304
           GEM L LQAKLLR+L+ + F ++G  QT +V++RI+AATN+DL+A    G FR DL+YRL
Sbjct: 247 GEMPLVLQAKLLRILQEREFERIGGHQTIKVDIRIIAATNRDLQAMVKEGTFREDLFYRL 306

Query: 305 SVFTITLPPLRERKADIPALAKYYLKEFADKVNRSTPKMDDKILSLLSDHSWKGNIRELK 364
           +V  + LPPLR+R+ DI  LA ++L++F+ +  R    +D   +SLL+  SW GNIREL 
Sbjct: 307 NVIHLILPPLRDRREDISLLANHFLQKFSSENQRDIIDIDPMAMSLLTAWSWPGNIRELS 366

Query: 365 NVIERLVILSDGDTLSVTALPPEF---------FEFAPIENDYNLQQ----IEKQHIQKV 411
           NVIER V+++ G  +    LPP+           + AP+  + NL++    +EK+ I +V
Sbjct: 367 NVIERAVVMNSGPIIFSEDLPPQIRQPVCNAGEVKTAPV-GERNLKEEIKRVEKRIIMEV 425

Query: 412 LIHTKGNKTETSRLLGIGLTTLYRKIEEYQI 442
           L   +GN+T T+ +LGI    L  K++EY I
Sbjct: 426 LEQQEGNRTRTALMLGISRRALMYKLQEYGI 456