Pairwise Alignments

Query, 1192 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1172 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  640 bits (1650), Expect = 0.0
 Identities = 400/1179 (33%), Positives = 621/1179 (52%), Gaps = 51/1179 (4%)

Query: 41   RIKLTALICFITCLHIYAAGYGQS---ITLSVKNASLQLVLDKIEKQSGYNLWVQTELLK 97
            R+ L  L+C    L   +   G     + +    ASL  VL  +E Q+ +      +L++
Sbjct: 18   RVFLIQLVCLQALLANPSNSQGLEDYHVRVDAHKASLVEVLSGLEHQTDFRFAYNQKLIQ 77

Query: 98   KSNKVSLAVKNKPLDAVLKDVFKDQTLSYAIVGKTIVVKNKVEEQNNIFGGPLMVFVNIE 157
               K++L + +  L  VLK + +     +  + ++I V   V  Q+     P+     ++
Sbjct: 78   SQQKITLKL-DADLRTVLKKITEQCDFQFRRIDESIFV-TAVNTQDKS-RKPVEEDRTLK 134

Query: 158  GKIVDSK-GAPLPGASVKVKGTTKATTANTEGKFSLVAD-KNDVLLISFVGYKTKEVPLN 215
            GK++D++   P+ G ++ V+G +K T  + EG+F L  D K   L +SF+GY+ K + + 
Sbjct: 135  GKVIDAETDEPIVGGTIIVEGGSKGTVTDLEGRFELTVDGKARRLRVSFLGYEPKTIEIG 194

Query: 216  GQSTLTIQLEESAAELSDFVVVGYGSTKKVNLTGAVSTVSGDVLKDRPISNIAQGLQGVI 275
             Q+  TI L      L + VVVGYG  KK NL+GAV  + G  L    ++ I + L G +
Sbjct: 195  NQNQFTISLSPKEGVLEEVVVVGYGEQKKANLSGAVDNIGGKSLSALQVNTIGEALLGQL 254

Query: 276  PNLTITNFSGQPGRTSDLNIRGYESINGGSPLIVIDGVPTTSNSSLYSLNPQDVENITVL 335
            P + +    G+PGR +  NIRG  SINGG PLIVIDGVP T+N  L +++P D+E I+VL
Sbjct: 255  PGVYVDIADGKPGRAAGFNIRGSTSINGGGPLIVIDGVPQTTND-LNNISPHDIEEISVL 313

Query: 336  KDAASAAIYGGRATFGVILITTKSGKFNSGLNIEFSSNFSDKRLTELPNIVTDPATVMRV 395
            KDAAS AIYG RA+FGVIL+TTK G  N  +++ + + F   + T +P +  +P   + +
Sbjct: 314  KDAASTAIYGARASFGVILVTTKRG--NEAMSVRYDNYFGFSKPTRVPELYDNPLDYLSI 371

Query: 396  KNEGYKAYYGTDLYNQTFMDYANKRSADPSLPPYYIDPADPTKYVYVGST--NWFDELFR 453
                + A  G + +    + Y  + +ADPSLP   ++       + +G    N++D  FR
Sbjct: 372  NENEFNANIGHNYFTDAQIAYPEQVAADPSLPHATVEDIGGRPNLLLGGQVYNYYDLWFR 431

Query: 454  KNTPTWDNNLSIRGGTEKVTYNVSAGYLRQEGLFEGNPDVYSRYSLRSKTEFKATSWLKL 513
              TP  ++  S+ G  +K  Y +S  +  +EG     P+  +RY+LRS   +  T  L +
Sbjct: 432  DLTPKQNHRFSVGGKDKKFQYYLSGDFNHEEGALSFKPEKINRYTLRSNITYNVTENLSV 491

Query: 514  GNTTQLSRTGYKYPTLWNGPSRGDLFHAIGR----IPSFEIVNNPNGSYTANGVLLGYLK 569
             N+T L +   ++P  +      +++  I      +P +  ++      T  G    +++
Sbjct: 492  FNSTSLVKRDEEHPNQYLYGFTSNVWRFIENSNPMMPEYVEIDGEMVP-TDIGFYREFVE 550

Query: 570  DGGRGESQKNDYLTTFEAQTNFFKNSLRVTTNYTFQSVNGNFL------DPYIPLEYQYA 623
            +    E   +D  +T           L++  + T+Q  N   L       PY  L   + 
Sbjct: 551  NQSGIEQAMHDTKSTIGVDWKILGGKLKLHVDGTYQFTNTEKLRWWDNTGPY--LSNSFN 608

Query: 624  NPNVNIQ----DGQSGLGQGYNTSKYNVFNVFGEYEKNFGKHNVKAMAGYSQEGYHEDSN 679
            N N+ +      G S + +    +  N  N +G Y+ ++G HN+  MAGY+QE Y+   +
Sbjct: 609  NRNIVLDYYADAGPSKIYRSRWRTIRNNINAYGTYDTSYGLHNLTVMAGYNQESYNYLYS 668

Query: 680  SIFRNDLISSNTPNIGLALGNPSYTSTAGEWALRSQFFRVNYAYDNKYLLEVNGRRDGSS 739
               R   +     ++ LA G  + +    + A RS F R+NY ++ KYLLE+NG    SS
Sbjct: 669  YADREYPLQVPQHSLNLASGVANVSDDDDKNASRSVFTRINYNWNGKYLLEINGSYFLSS 728

Query: 740  RFPVDDRYVFLPSGSIGWRVSEENFFKGLKPAISDFKLRFSYGSLGNQTVSKAGSSDPDY 799
            +F  ++R     +GS  WR+SEE+FF  ++  +++ KLR SYGS+GN  +          
Sbjct: 729  KFAKENRGHAFIAGSGAWRISEESFFDNIRSTVNNVKLRVSYGSIGNANIGS-------- 780

Query: 800  YPYIPLMSSSSKITNILGGNQPPAVYAPGLVSPSLTWERQYTKNWGTDIALMGNKLNISY 859
            Y YIP+M  S      L G +     +P   S + TWE   T N+G D     N+L  + 
Sbjct: 781  YDYIPIMGVSQSAYT-LEGERVNYTSSPNPKSANFTWETVETLNFGLDATFFRNRLTTTL 839

Query: 860  DYYIRDVKDMLTSSRQLPAVLGTPPPRTNAADLRTRGWELSLNYNNKFNLASSDFKYNFR 919
            D Y R+  +ML + R LP+V G   P+ N A L+T+GWEL+L +N+   +  + F Y  R
Sbjct: 840  DVYQRNTDNMLANFRSLPSVFGATVPKENIASLKTQGWELNLAWNDTRKVGRNPFSYGVR 899

Query: 920  FVLADNYTVITKFDNPNGNIGEYYVGKRIGEIWGMETEGLFQSDAEVAAHADQSAVDGYY 979
            F ++D ++ IT + NP   + +YY G+++GEIWG+ TEG FQ+D E A +      + Y 
Sbjct: 900  FNISDYHSEITDYYNPTNYLADYYRGQQLGEIWGLTTEGYFQTDEE-AQNGALLETNSYK 958

Query: 980  GF-HAGDPKYRDLNGDGKINIGKLTLGDHGDLKVIGNREARYTYGISGGFNWKGFDMSFF 1038
             +  AG  K++D+NGDG IN G+ TL + GD + IGN   RY YGI+    WKG D++ F
Sbjct: 959  AYAAAGTIKFQDINGDGVINFGERTLENPGDYRKIGNTTPRYQYGITLNGAWKGIDLNVF 1018

Query: 1039 LQGVAKRDFWLGTSSY-FWGTYRAPWEHVYQHQLDNMWSPENPDAYFPRYAAW-RTGDIA 1096
             +GV KRD + G  +  FWG Y   ++ + QH +D  W+P+NPDAYFPR   +   G+  
Sbjct: 1019 FRGVGKRDIYPGAEAVNFWGPYNRKYQVMLQHTVDERWTPDNPDAYFPRPQGYLALGN-- 1076

Query: 1097 EWRDLDVVQTRYLQDASYLRLKNLTIGYRLPEKLVKRIGLKSFRFYLSGENIGEINNIKF 1156
               DL V QT+YLQDAS+LRLKNLT+GY +P  L +RI +   R Y SG+N+ E   + F
Sbjct: 1077 --NDLGVPQTKYLQDASFLRLKNLTVGYTIPSSLTERIKISHVRVYFSGQNLWETTALHF 1134

Query: 1157 KVLDPETLGGD---GSSSWGTGKSYPFQRSYSAGINVTL 1192
              LDPE L  D     S  G G +YP QR +S G+ V L
Sbjct: 1135 S-LDPEGLTKDPDANESRVGLGTAYPIQRVFSFGLQVKL 1172