Pairwise Alignments

Query, 1192 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1123 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  478 bits (1229), Expect = e-138
 Identities = 364/1199 (30%), Positives = 568/1199 (47%), Gaps = 127/1199 (10%)

Query: 35   KRRFIMRIKLTALICFITCL-HIYAAGYGQS------ITLSVKNASLQLVLDKIEKQSGY 87
            +R+ +MR  L  L+C    L H +  G  Q       +TLS+++  ++ VL  IE+++ +
Sbjct: 9    RRKLLMRC-LFLLMCMTGGLAHQHTFGSQQKDLESVFVTLSIEDEPVEKVLYVIEQKTEF 67

Query: 88   NLWVQTELLKKSNKVSLAVKNKPLDAVLKDVFKDQTLSYAIVGKTIVVKNKVEEQNNIFG 147
                  + ++ S  VS+  K + L +VL+ +     L +  +  TI V        +  G
Sbjct: 68   RFAYDLDQVRNSAMVSIEAKEQSLLSVLEAISSKTQLKFKQINNTIHVSKAAPTTKSKVG 127

Query: 148  GPLMVFVNIEGKIVDSKGAPLPGASVKVKGT-TKATTANTEGKFSLVADKNDVLLISFVG 206
               +  V + GK++D  GAPLPGASV V+G  ++ T  + +G +++ A +   L+ S++G
Sbjct: 128  PVQLEIVEVTGKVLDDTGAPLPGASVVVEGEPSRGTVTDMDGNYTIDAPEGATLVFSYIG 187

Query: 207  YKTKEVPLNGQSTLTIQLEESAAELSDFVVVGYGSTKKVNLTGAVSTVSGDVLKDRPISN 266
            +++K+V +  QS++ + L  S + L + VVVGYG+ KK+++TGAV  V  + L+ RP++ 
Sbjct: 188  FESKKVVVGSQSSINVTLAMSTSSLEEVVVVGYGTQKKLSVTGAVDQVGQEKLEGRPVAT 247

Query: 267  IAQGLQGVIPNLTITNFSGQPGRTSDLNIRGYESINGGSPLIVIDGVPTTSNSSLYSLNP 326
            ++Q LQGV  NL +   + +PG   +LNIRG  ++   SPLIVIDGV       +  LNP
Sbjct: 248  MSQALQGVSANLIVQQRNSEPGAGINLNIRGISTLGDNSPLIVIDGV---IGGDINLLNP 304

Query: 327  QDVENITVLKDAASAAIYGGRATFGVILITTKSGKFNSGLNIEFSSNFSDKRLTELPNIV 386
             D+E+++VLKDA SAAIYG RA  GV+LITTK GK N+   + ++           P   
Sbjct: 305  SDIESVSVLKDAGSAAIYGSRANNGVVLITTKQGKKNTRPKVTYNGLVG----VNTPQFF 360

Query: 387  TDPATVMRVKNEGYKAYYGTDLYNQTFMDYANKRSADPSLPPYYIDPADPTKYVYVGSTN 446
            T P             Y    L N++  +     +           P +  +    G T 
Sbjct: 361  TQPV----------HGYQNAMLRNESAFNAGRSEAV--------FSPEEIRQIRENGDTE 402

Query: 447  WFDELFRKNTPTWDNNLSIRGGTEKVTYNVSAGYLRQEGLFEGNPDVYSRYSLRSKT--- 503
            WF +   KN    ++NLS+ GG+E  TY VSAGY  Q   F G    Y+RY+ R      
Sbjct: 403  WFAKEIFKNALQQNHNLSVSGGSENSTYLVSAGYTDQRSNFVGPEKGYTRYNFRMNLTNE 462

Query: 504  --EFKATSWLKLGNTTQLSRTGYKYPTLWNGPSRGDLFHAIGRIPSFEIVNNPNGSYTAN 561
               FK +S  +L  T +L +         +  S G L     R+P +    +  G Y  N
Sbjct: 463  FGRFKMSS--RLAYTRRLIKD--------HSFSSGTLMADANRVPLYYTQKDSLGRYLTN 512

Query: 562  GVL-----LGYLKDGGRGESQKNDYLTTFEAQTNFFKNSLRVTTNYTFQSVNGNFLDPYI 616
             +L     LG L+ GG  E   ++       +     + L +   + F   + N     +
Sbjct: 513  DILQQFNPLGILEKGGFREHTDDNVFGNLSGELK-LTDDLTMRGVFGFNMYSNNMYARTL 571

Query: 617  PLEYQ----YANPNVNIQDGQSGLGQGYNTSKYNVFNVFGEYEKNFG-KHNVKAMAGYSQ 671
             +++     Y        + + GL             +  +Y K F  +H + A+ G S 
Sbjct: 572  QVDFYPRGIYGGDRNTRDENRKGLDLN--------SQLMLQYNKVFSDRHEINALVGVSN 623

Query: 672  EGYHEDSNSIFRNDLISS-NTPNIGLALGNPSYTS--TAGEWALRSQFFRVNYAYDNKYL 728
            E + +    I++        TP     +   SY S  ++ E +L S F RV+Y  D KY 
Sbjct: 624  ENHTDRGVGIYKRLTDPELGTPITETIINPDSYNSNQSSSENSLNSLFGRVSYDLDKKYF 683

Query: 729  LEVNGRRDGSSRFPVDDRYVFLPSGSIGWRVSEENFFKGLKPAISDFKLRFSYGSLGNQT 788
             E + R DGSS+F  D R+ F PS SIG+R+SEE+F +  +    + K+R SYG LGNQ 
Sbjct: 684  AEFSFRYDGSSKFREDIRWGFFPSASIGYRISEEDFMRNYRDRFGEVKIRSSYGVLGNQN 743

Query: 789  VSKAGSSDPDYYPYIPLMSSSSKITNILGGNQPPAVYAPGL--VSPSLTWERQYTKNWGT 846
            V          Y Y    ++     N  G N   AV   G    +P++ WER  T N G 
Sbjct: 744  VGN--------YQY---QTTFFTFQNAYGFNN-DAVGGTGFNYANPNIQWERAATFNIGA 791

Query: 847  DIALMGNKLNISYDYYIRDVKDMLTSSRQLPAVLGTPPPRTNAADLRTRGWELSLNYNNK 906
            D+  +   L +S DY+ +   D+L     +P V GT  P  N   +  +GWE++  Y ++
Sbjct: 792  DLDFLDGALTLSLDYFDKVTSDILVPP-AVPGVFGTSLPDFNNGKVGNKGWEVTTTYRHR 850

Query: 907  FNLASSDFKYNFRFVLADNYTVITKFDNPNGNIG--EYYV----GKRIGEIWGMETEGLF 960
              L    F++ F F LAD+   +  F       G  E  V    G       G++ +G F
Sbjct: 851  GEL----FEHTFSFNLADSKNKVLDFQGEERLTGVEELQVLLKEGYPFNSYVGLKRDGYF 906

Query: 961  QSDAEVAAHADQSAVDGYYGFHAGDPKYRDLNGDGKINIGKLTLGDHGDLKVIGNREARY 1020
            Q+  E    A+            GD +Y D++G+G IN          D  V GN   R 
Sbjct: 907  QTIVE----AENGPKPEGLNVQPGDNRYVDVDGNGIIN--------DEDKYVFGNPFPRM 954

Query: 1021 TYGISGGFNWKGFDMSFFLQGVAKRDFWLGTSSYFWGTYRAPWEH-----VYQHQLDNMW 1075
            T+G++     KGFD++ F QGV  R   +       G    P+ +     +Y+HQLD  W
Sbjct: 955  TFGLTYNVRVKGFDLNVFAQGVGSRTMMIR------GEMVEPFHYNYGMTMYEHQLD-YW 1007

Query: 1076 SPENPDAYFPRYAAWRTGDIAEWRDLDVVQTRYLQDASYLRLKNLTIGYRLPEKLVKRIG 1135
            +P+NPDA FPR A    G  +   +       YL DA+YLRLKN+ +GY LP+ L  ++G
Sbjct: 1008 TPQNPDARFPRLA--DNGSQSNTNNFRRGSDMYLFDAAYLRLKNVQVGYTLPKSLADKLG 1065

Query: 1136 LKSFRFYLSGENIGEINNIKFKVLDPETLGGDGSSSWG---TGKSYPFQRSYSAGINVT 1191
            +++ R YLSG+N+  ++ + F  +DPE    D S   G   + ++YP    Y  G+++T
Sbjct: 1066 MQNCRAYLSGQNLFTLSKVDF--VDPELSEFDNSMRNGGANSARAYPTMVYYGFGLDIT 1122