Pairwise Alignments

Query, 1192 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1155 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  519 bits (1337), Expect = e-151
 Identities = 384/1194 (32%), Positives = 603/1194 (50%), Gaps = 100/1194 (8%)

Query: 36   RRFIMRIKLTALICFITCLHIYAA--GYGQS--ITLSVKNASLQLVLDKIEKQSGYNLWV 91
            R+ +M   +  ++ F+T L+   A   YGQ+  +TL VK+  L+ VL +IE Q+ +    
Sbjct: 21   RQVVMSPPILMVLIFLTTLNPIQAYSAYGQNEKVTLDVKDKPLEAVLYQIESQTSFKFIY 80

Query: 92   QTELLKKSNKVSLAVKNKPLDAVLKDVFKDQTLSYAIVGKT-IVVKNKVEEQNNIFGGPL 150
              + L  +  ++L+V++KPL+ VL  +F  + + Y I+  T IV+K K +   N     +
Sbjct: 81   SNDELNAAETITLSVQDKPLEEVLNVLFNPRKIEYQIIMDTQIVLKKKADNDPN--ESLV 138

Query: 151  MVFVNIEGKIVDSKGAPLPGASVKVKGTTKATTANTEGKFSLVADKND-VLLISFVGYKT 209
            +  V I G + D  GAPLPGAS+  KGT   T A+ +G F+L     D VL IS++G+  
Sbjct: 139  LQAVTITGTVTDKNGAPLPGASILEKGTNNGTVADIDGHFTLEVSAADAVLKISYLGFIA 198

Query: 210  KEVPLNGQSTLTIQLEESAAELSDFVVVGYGSTKKVNLTGAVSTVSGDVLKDRPISNIAQ 269
            +E PLNG++T+ I LEE    L + +VVGYGS K+ N+TGAV+ V GDVL+ R IS++A 
Sbjct: 199  QEYPLNGKTTINITLEEDVTGLDEVIVVGYGSQKRSNITGAVAEVKGDVLEGRVISSVAG 258

Query: 270  GLQGVIPNLTITNFSGQPGR-TSDLNIRGYESING-GSPLIVIDGVPTTSNSSLYSLNPQ 327
            GLQG+IP LT+T+ SGQPG   S++ IRG  +IN   SPLI+IDGV   +   +  LNP 
Sbjct: 259  GLQGLIPGLTVTSPSGQPGAGASNMLIRGVNTINSQTSPLILIDGV---AGGDINLLNPD 315

Query: 328  DVENITVLKDAASAAIYGGRATFGVILITTKSGKFNSGLNIEFSSNFSDKRLTELPNIVT 387
            D+E++TVLKDAAS+AIYG RA  GVIL+TTK G     +++ +S+ F  +     P +V 
Sbjct: 316  DIESVTVLKDAASSAIYGARAANGVILVTTKKGGGEEKVSLNYSNYFGIQTPIATPELV- 374

Query: 388  DPATVMRVKNEGYKAYYGTDLYNQTFMDYANKRSADPSLPPYYIDPADPTKYVYVGSTNW 447
            +    M ++NE  +A  G  +    + D A +R    + P  Y             +T+W
Sbjct: 375  NGREYMTLENEARRA-RGVAV---PYADEAFERYDSGNFPNDY------------SNTDW 418

Query: 448  FDELFRKNTPTWDNNLSIRGGTEKVTYNVSAGYLRQEGLFEGNPDVYSRYSLRSKTEFKA 507
              E ++ ++   ++N +++G T+  +Y +S GYL Q GL  G+P   SR ++R +   K 
Sbjct: 419  VSETYKSHSSQQNHNFNVQGQTDNSSYYLSYGYLEQTGLVVGDPYFSSRNNVRLRLGTKV 478

Query: 508  TSWLKLGNTTQLSRTGYKYPTLWNGPSRGDLFHAIGRI-PSFEIV-----------NNPN 555
               L L     +S   + Y     G     +F    RI P   ++           ++P 
Sbjct: 479  LDRLTL--DANISYVDF-YKRDAGGAGTSGVFRLSQRISPLLPVMWQQPTADGGWEDSPY 535

Query: 556  GSYTANGVLLGYLKDGGRGESQKNDYLTTFEAQTNFFKNSLRVTTNYTFQSVNGNFLD-- 613
             SY +    +    + G  +S+       F+A  +   + + +   Y +   N +  D  
Sbjct: 536  WSYGSVTNPVRTAHESGYTKSKSRTLNGNFKATLDLI-DGMYINAQYAYNYYNRDIKDWT 594

Query: 614  PYIPLEYQYANPNVNIQDGQSGLGQGYNTSKYNVFNVFGEYEKNFGKHNVKAMAGYSQEG 673
              +P       P+   ++ ++G+   + T+          Y+K  G+H +K +AGYSQE 
Sbjct: 595  ATMPRFLADGTPHPANENIRNGIANSHYTTLTQTLLSTFNYDKVIGRHGLKFLAGYSQEW 654

Query: 674  YHEDSNSIFRNDLISSNTPNIGLALGNPSYTSTAGEWALRSQFFRVNYAYDNKYLLEVNG 733
                     R +++      I     +     T+ EWALRS F R+NY +D KYL E N 
Sbjct: 655  SSMPRLYASRRNILMDGITEIDAGTEDIVNGGTSEEWALRSYFGRINYDFDQKYLFEANL 714

Query: 734  RRDGSSRFPVDDRYVFLPSGSIGWRVSEENFFKGLKPAISDFKLRFSYGSLGNQTVSKAG 793
            R DG+SRF  D+R+   PS S GW+ +EE F    KP ++  K+R S+G LGNQ +S   
Sbjct: 715  RVDGTSRFSKDNRWGVFPSFSAGWKFTEEAFMDFAKPFLNVGKIRASWGELGNQNIS--- 771

Query: 794  SSDPDYYPYIPLMSSSSKITNILGGNQPPAVYAPGLVSPSLTWERQYTKNWGTDIALMGN 853
                +YYPY+  +   +K   I G  +        L + ++ WE     N G D +++ +
Sbjct: 772  ---GNYYPYLTEIERQTKAYPI-GAKENVGFRQYSLANENIQWETIQMLNIGADFSMLKD 827

Query: 854  KLNISYDYYIRDVKDMLTSSRQLPAVLGTPP----PRTNAADLRTRGWELSLNYNNKFNL 909
            ++ +S D++ +   + L      P+++G       P  N   +  +GWE++L ++++   
Sbjct: 828  RMTLSVDWFKKKNINALLKP-IYPSLIGITSSSNLPLENIGAIENKGWEIALGWSDQV-- 884

Query: 910  ASSDFKYNFRFVLADNYTVITKFDNPNGNIGEYY--VGKRIGEIWGMETEGLFQSDAEVA 967
               +F+Y+    +AD    IT   +   ++G+    VG  +   +G  T GL Q D   A
Sbjct: 885  --GEFRYSINANIADAKNKITDMGSSAASLGDNIRRVGDPVNAYYGYLTNGLAQIDDFEA 942

Query: 968  --------AHADQSAVDGYYG-FHAGDPKYRDLNGDGKINIGKLTLGDHGDLKVIGNREA 1018
                     +     +  Y      GD  YRD++G+     G   L D  D  V G+   
Sbjct: 943  FDESTGRYTNPTFPVISSYADIIQPGDVIYRDISGEAGQPDG---LIDEYDKVVFGDPYP 999

Query: 1019 RYTYGISGGFNWKGFDMSFFLQGVAKRDFWLGTSS--YFWGTYRAPWEHVYQHQLDNMWS 1076
            RY+YGI G   WKGFD+SFFLQGV K + +L   +   F   Y  P + V+     + W+
Sbjct: 1000 RYSYGIRGFAAWKGFDLSFFLQGVGKVNGYLRDEARHAFINDYSVP-KKVHM----DRWT 1054

Query: 1077 PENPDAYFPRYAAWRTGDIAEWRDLDVVQTRYLQDASYLRLKNLTIGYRLPEKLVKRIGL 1136
            PEN DA +PR       +I       +    +L+DASYLRLKNL IGY LP++L++RI L
Sbjct: 1055 PENTDASYPRMYYQPDHNI-------LFSNYWLEDASYLRLKNLQIGYSLPQQLIERIKL 1107

Query: 1137 KSFRFYLSGENIGEINNIKFKVLDPETLGGDGSSSWGTGKSYPFQRSYSAGINV 1190
               R Y +GEN+  I +  F   DPE           +G +YP  R+ + G+ +
Sbjct: 1108 SRCRVYFTGENLFTITDY-FGGFDPEV-------RETSGDAYPQVRTMALGVQL 1153