Pairwise Alignments

Query, 1192 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1116 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  449 bits (1154), Expect = e-130
 Identities = 352/1175 (29%), Positives = 564/1175 (48%), Gaps = 100/1175 (8%)

Query: 38   FIMRIKLTALICFITCLHIYAAGYGQSITLSVKNASLQLVLDKIEKQSGYNLWVQTELLK 97
            +++ +K T ++C      + A  + Q +TL  K   L+ V++ IE QS Y      E + 
Sbjct: 20   YLLVMKWTLILCLSLVFQVTAKVHSQELTLKAKGLPLKEVMEMIESQSKYRFVFNDETVS 79

Query: 98   KSNKVSLAVKNKPLDAVLKDVFKDQTLSYAIVGKTIVVKNKVEEQNNIFGGPLMVFVNIE 157
            +S  V + V++  L + L +VF +Q  +Y +V   IV+K K         G     + I 
Sbjct: 80   QSKPVFVDVESGSLKSTLSEVFSNQPFTYELVDTYIVIKPKA--------GIPAAIIEIT 131

Query: 158  GKIVDSKGAPLPGASVKVKGTTKATTANTEGKFSLVADKND-VLLISFVGYKTKEVPLNG 216
            G ++   G PLPGA+V+VKG+++ T  + +G F+    + D VL++SF+GY  +E+P+N 
Sbjct: 132  GTVLGEDGEPLPGATVRVKGSSRGTVTDLDGTFAFSGLEEDAVLVVSFIGYDPQEIPVNS 191

Query: 217  QSTLTIQLEESAAELSDFVVVGYGSTKKVNLTGAVSTVSGDVLKDRPISNIAQGLQGVIP 276
            +S + + L+ S  +LS+ VV+GYG   +  +T A+S    D    R +    Q +QG +P
Sbjct: 192  RSKIEVILKPSQNDLSEIVVIGYGQQDRKEVTSAISNFRPDEKNFRQVLGPDQLMQGRMP 251

Query: 277  NLTITNFSGQPGRTSDLNIRGYESING-GSPLIVIDGVPTTSNSS-----------LYSL 324
             + +   +G PG    ++IRG  S++G   PL V+DG+P  ++++           L  L
Sbjct: 252  GVHVGAGAGTPGSNVRVSIRGIGSLSGQNEPLYVVDGIPLVNHNAALFNLGEGMNPLSEL 311

Query: 325  NPQDVENITVLKDAASAAIYGGRATFGVILITTKSGKFN-SGLNIEFSSNFSDKRLTELP 383
            NP D+E+I VLKDAASAAIYG RAT GV++ITTKSGK   S LNIE  +NF  + L  L 
Sbjct: 312  NPNDIESIEVLKDAASAAIYGSRATNGVVIITTKSGKAGQSSLNIE--TNFGIQYLPNLD 369

Query: 384  NI-VTDPATVMRVKNEGYKAYYGTDLYNQTFMDYANKRSADPSLPPYYIDPADPTKYVYV 442
             + + D    + V NE    Y   + Y+            D +   Y  DP     Y  +
Sbjct: 370  KLKMADSDLYLEVLNEARYNYNQQNGYSP----------GDGNFVDYMEDP-----YPGL 414

Query: 443  GSTNWFDELFRKNTPTWDNNLSIRGGTEKVTYNVSAGYLRQEGLFEGNPDVYSRYSLRSK 502
              TNW D + R    + + N+S   GT+K    +S GYL QEG+ + N   Y +Y+ +  
Sbjct: 415  PDTNWLDLVLRDALVS-NVNVSFSTGTDKTKLYISGGYLNQEGVIKTND--YKKYNAKIN 471

Query: 503  TEFKATSWLKLGNTTQLSRT-GYKYPTLWNGPSRGDLF-HAIGRIPSFEIVNNPNGSYTA 560
               +A +WL++G  T LS +  ++ P   NG     +F  ++G+ P F+    PNG Y  
Sbjct: 472  VTHQAVNWLEIGTNTNLSFSRNHRIP---NGTYGSSIFLRSMGQRP-FDRPYKPNGDYYV 527

Query: 561  NGVLLGYLKDGGRGESQKNDYLTTFEAQTNFFKNSLRVTTNYTFQSVNGNFLDPYIPLEY 620
             G       +  +  +++N  L  +    N + +   +  + +F   N   +D     +Y
Sbjct: 528  GGTEELVYHNNLQILNEQNTKLDNYRMLGNVYAD---IKFSPSFHLKNSFGMDAIYTEDY 584

Query: 621  QYANPNVNIQDGQSGLGQGYNTSKYNVFNVFGEYEKNFGKHNVKAMAGYSQEGYHEDSNS 680
             Y         GQ  L          +      ++  FGK +V A+ G+S +     +N 
Sbjct: 585  LYYTDEHPYGAGQGRLLDERRMMTNGLIENTLYFDHTFGKLSVNALVGHSYQKVTTSTNY 644

Query: 681  IFRNDLISSNTPNIGLALGNPSYTSTAGEWALRSQFFRVNYAYDNKYLLEVNGRRDGSSR 740
            I      S +   + +A    + +S  GE AL S + R N ++++KYLL ++ R DGSS+
Sbjct: 645  IDGRGFPSPSFDVLSVASEIANASSGFGENALESYYSRANLSWEDKYLLSLSIRADGSSK 704

Query: 741  FPVDDRYVFLPSGSIGWRVSEENFFKGLKPAISDFKLRFSYGSLGNQTVSKAGSSDPDYY 800
            F  + RY   PS S GW +S+ENF+K  +   +D KLR SYG+ GNQ     GS     Y
Sbjct: 705  FSPEKRYGSFPSISAGWNLSDENFWKFSQ---TDLKLRASYGATGNQ--DGIGS-----Y 754

Query: 801  PYIPLMSSSSKITNILGGNQPPAVYAPGLVSPSLTWERQYTKNWGTDIALMGNKLNISYD 860
             Y  LMS  +       GN   ++   G  +P+LTWE     + G D+ L   K N S D
Sbjct: 755  AYQALMSGGAN----YAGNSGLSISTFG--NPNLTWETANQFDVGIDLGLWSGKANFSAD 808

Query: 861  YYIRDVKDMLTSSRQLPAVLGTPPPRTNAADLRTRGWELSLNYNNKFNLASSDFKYNFRF 920
            Y+I++ +++L  +  + A  G     +N   +R  G E  L+YN++F        +N  F
Sbjct: 809  YFIKNTENLL-YNMPIHATSGFSSVTSNIGSMRNTGLEFLLDYNHRFGELQWQSSFNISF 867

Query: 921  VLADNYTVITKFDNPNGNIGEYYVGKRIGEIWGMETEGLFQSDAEVAAHADQSAVDGYYG 980
            +  +  +++       G      VG+ +G  +  +  G+FQ+D EV     +       G
Sbjct: 868  IQNELTSLLGDDPLLIGANRTLQVGEEVGSFYMYKMLGIFQTDEEVPEPLYEQ------G 921

Query: 981  FHAGDPKYRDLNGDGKINIGKLTLGDHGDLKVIGNREARYTYGISGGFNWKGFDMSFFL- 1039
              AGD  Y D+NGDG IN+         D ++IG     +  G S  F +K FD+S FL 
Sbjct: 922  VRAGDVHYEDVNGDGIINV--------DDRQIIGTSNPDFYGGWSNTFQYKNFDLSAFLT 973

Query: 1040 --QGVAKRDFWLGTSSYFWGTYRAPWEHVYQHQLDNMWSPENPDAYFPRYAAWRTGDIAE 1097
              QG      W  T+    G+ R  +    +      W+        PR A   TG    
Sbjct: 974  FSQGSEIYANWRITTERL-GSGRQGFR---EEPALERWTGPGTSNEVPR-AIHGTGYNT- 1027

Query: 1098 WRDLDVVQTRYLQDASYLRLKNLTIGYRLPEKLVKRIGLKSFRFYLSGENIGEINNIKFK 1157
                    +R+L+DAS+LRL+ L++GY LP+ L++++ +   R ++ GEN+   +N  + 
Sbjct: 1028 -----YNSSRFLEDASFLRLRTLSLGYSLPQSLLEKLQMSKLRIFVQGENLYLFSN--YT 1080

Query: 1158 VLDPE-TLGGDGSSSWGTGKSYPFQRSYSAGINVT 1191
             LDPE +   D         + P  R+   G+N +
Sbjct: 1081 GLDPEVSKNYDARYMSDDNMNLPQPRTIRLGLNAS 1115