Pairwise Alignments

Query, 1192 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1176 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  707 bits (1826), Expect = 0.0
 Identities = 433/1198 (36%), Positives = 656/1198 (54%), Gaps = 74/1198 (6%)

Query: 37   RFIMRIKLTALICFITCLHIYAAGYGQS--------ITLSVKN--ASLQLVLDKIEKQSG 86
            R I +  L   +  +  L++  AG  ++        +T++VK   A L  VL+ I+ Q+ 
Sbjct: 9    RMISKYTLIGFVFQLAFLNLLHAGPSKAQGNLDMEKVTVNVKATAAPLPSVLESIKSQTD 68

Query: 87   YNLWVQTELLKKSNKVSLAVKNKPLDAVLKDVFKDQTLSYAIVGKTIVVKNKVEEQNNIF 146
            +      +++  + ++S+  +N+PL+ VL  + K+   ++  V   I +K        + 
Sbjct: 69   FVFIYDDKIIPSNTEISIEARNEPLENVLLTLSKEHRWAFKQVNDRISIK----PIKGLH 124

Query: 147  GGPLMVF-VNIEGKIVDSKGAPLPGASVKVKGTTKATTANTEGKFSLVADKNDVLLISFV 205
             G +++  V + G ++D+   P+PG +V VKGTT  TT + +G++ +   +N VL+ SFV
Sbjct: 125  LGKIVIREVTVSGTVMDANNQPIPGVTVLVKGTTNGTTTDLDGRYRMNVPENSVLVFSFV 184

Query: 206  GYKTKEVPLNGQSTLTIQLEESAAELSDFVVVGYGSTKKVNLTGAVSTVSGDVLKDRPIS 265
            G+ ++EV +  +  + +QLEE  + L++ VVVGYG  KK+NLTGAV+ V  +V ++RP  
Sbjct: 185  GFVSQEVAVGNKDVIDVQLEEKISALNEVVVVGYGEQKKINLTGAVNQVGSEVTENRPAP 244

Query: 266  NIAQGLQGVIPNLTITNFSGQPGRTSDLNIRGYESIN-GGSPLIVIDGVPTTSNSSLYSL 324
            N+ + LQG +PNL I    G P R++  NIRG  SI  GG  L++IDGV    N     +
Sbjct: 245  NLTRMLQGTLPNLNIKMVDGSPTRSAAFNIRGMTSIGAGGDALVLIDGVEGDPN----LV 300

Query: 325  NPQDVENITVLKDAASAAIYGGRATFGVILITTKSGKF-NSGLNIEFSSNFSDKRLTELP 383
            NP DVE++T+LKDA+SAA+YG RA FGV+LITTKS K   S LN+    N S  + T +P
Sbjct: 301  NPNDVESVTILKDASSAAVYGSRAAFGVVLITTKSAKAGKSQLNVNL--NHSVNKRTVVP 358

Query: 384  NIVTDPATVMRVKNEGYKAYY----------GTDLYNQTFMDYANKRSADPSLPPY-YID 432
            ++V +     +  +E +  +Y           T  ++  ++D   +   DPSLP   Y++
Sbjct: 359  DLVNNGYQWAKNFDEAFYGWYDYKTHPISVNSTFPFSLEYLDRLRQHDEDPSLPKVEYVE 418

Query: 433  PADPTKYVYVGSTNWFDELFRKNTPTWDNNLSIRGGTEKVTYNVSAGYLRQEGLFEGNPD 492
              +  +Y Y G+T+WF    + N P  + ++S  GG E   Y +S  Y  Q+G+F  + D
Sbjct: 419  --EVGRYEYYGNTDWFKYHHKDNMPATEASISASGGNENARYFISGMYYHQDGIFNYSSD 476

Query: 493  VYSRYSLRSKTEFKATSWLKLGNTTQLSRTGYKYPTLWNGPSRGDLFHAIGRIPSFEIVN 552
             + +Y+LR+K E     WL L N   LS   Y YP L NG      + A+   P   ++N
Sbjct: 477  KFDKYNLRAKGEVNLNDWLVLENNFDLSTYTYGYPLLANGDINIWRYLAVQSYPML-LMN 535

Query: 553  NPNGSYTANGVLLG--YLKDGGRGESQKNDYLTTFEAQTNFFKNSLRVTTNYTFQS--VN 608
            NP+G+Y+ NGV +G  +L+   R +        T       F + L +  N+TF    + 
Sbjct: 536  NPDGTYSQNGVYVGASFLEGNSRSDQSNFFVRNTPTLTATPFGDLLTLKANFTFSKKFIK 595

Query: 609  GNFLDPYIPLEYQYANPNVNIQDGQSGLGQGYNTSKYNVFNVFGEYEKNFG-KHNVKAMA 667
               ++ Y+   Y  A  ++N + G S L Q  + + Y   N+  ++ K    +H++  + 
Sbjct: 596  DKRVNNYV--NYSNAPGDLN-RFGNSLLRQYEDETTYWGSNITAQFNKTLNEEHDLGLLL 652

Query: 668  GYSQEGYHEDSNSIFRNDLISSNTPNIGLALGNPSYTSTAG--EWALRSQFFRVNYAYDN 725
            GY+ E    ++ +  R+ L+    P+  L L   +YT   G  EW     F+R+NY+Y +
Sbjct: 653  GYNIESSLTENWNTSRDGLLVPGKPDYNL-LDGLNYTIRGGGSEWKYLGAFYRLNYSYKD 711

Query: 726  KYLLEVNGRRDGSSRFPVDDRYVFLPSGSIGWRVSEENFFKGLKPAISDFKLRFSYGSLG 785
            KYLLE NGR DGSS+FP D+RY F PS S GW VSEE F +  +  +++ K+R SYGSLG
Sbjct: 712  KYLLEFNGRYDGSSKFPSDERYGFFPSVSAGWNVSEEGFMQNTRNWLANLKIRSSYGSLG 771

Query: 786  NQTVSKAGSSDPDYYPYIPLMSSSSKITNILGGNQPPAVYAPGLVSPSLTWERQYTKNWG 845
            N  V+         Y Y+  M S +K + +L G Q      PG++   LTWER  T N G
Sbjct: 772  NGNVAP--------YRYLETM-SVNKSSVMLEGIQKGYTSLPGVIPAGLTWERATTFNIG 822

Query: 846  TDIALMGNKLNISYDYYIRDVKDMLTSSRQLPAVLGTPPPRTNAADLRTRGWELSLNYNN 905
             D + +  +L ++YD+Y R   DM T  + LP V G   P  N ADL T+GWE +L + +
Sbjct: 823  VDASFLDGRLGVNYDWYNRMTTDMFTYGQPLPNVFGATEPYGNYADLSTKGWEFTLTWKD 882

Query: 906  KFNLASSDFKYNFRFVLADNYTVITKFDNPNGNIGE-YYVGKRIGEIWGMETEGLFQSDA 964
            +  +    F Y F   L DN + ITKF+NP   +G  YYVG+ +GEIWG  TEGLF S+ 
Sbjct: 883  QAIVGGKPFTYGFNGSLWDNRSTITKFNNPEKVLGSGYYVGQNVGEIWGYVTEGLFTSEE 942

Query: 965  EVAAHADQSAVDGYYG--FHAGDPKYRDLNGDGKINIGKLTLGDHGDLKVIGNREARYTY 1022
            EV  HADQ  +    G  +  GD K+ DLN DG IN G  T+ + GD KVIGN   RY +
Sbjct: 943  EVLNHADQDFLRNSNGNIWLPGDIKFADLNDDGVINQGDNTVNNPGDRKVIGNNTPRYQF 1002

Query: 1023 GISGGFNWKGFDMSFFLQGVAKRDFWLG-TSSYFWGTYRAPWEHVYQHQLDNMWSPENPD 1081
            G +   NW  F +S F QG+AKRD++    +  FWG Y  P+       +++ W+ ENPD
Sbjct: 1003 GFTLNANWNNFGISAFFQGIAKRDWYFAPEADLFWGIYNRPYSFQPTKMMNDYWTEENPD 1062

Query: 1082 AYFPR---YAAWRTGDIAEWRDLDVVQTRYLQDASYLRLKNLTIGYRLPEKLVKRIGLKS 1138
            AYFPR   Y A  TG     R L   QTRYLQDASY+RLKN+T+ Y LP + V +IG++ 
Sbjct: 1063 AYFPRLRGYTALGTG-----RSLGAPQTRYLQDASYIRLKNITVDYTLPTQWVNKIGMQR 1117

Query: 1139 FRFYLSGENIGEINNIKFKV--LDPETLG---GDGSSSWGTGKSYPFQRSYSAGINVT 1191
             + + +G+NI     +       DPE +    GD ++ +G G +YP  +SY+ G+N++
Sbjct: 1118 AKIFFTGQNIWTRTGLSKHTDNFDPEIIENPLGDMTNGYGQGDAYPMLKSYTLGVNLS 1175