Pairwise Alignments

Query, 1192 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1145 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  677 bits (1747), Expect = 0.0
 Identities = 410/1148 (35%), Positives = 635/1148 (55%), Gaps = 72/1148 (6%)

Query: 65   ITLSVKNASLQLVLDKIEKQSGYNLWVQTELLKKSNKVSLAVKNKPLDAVLKDVFKDQTL 124
            I+L  +N++L+ V   IE ++ +  +   +L+    K++L  +N  L +VL+++     L
Sbjct: 48   ISLDEQNSTLKEVFSSIETKTAFQFFYDEDLIAVERKLTLTKRNVSLTSVLEELSVAANL 107

Query: 125  SYAIVGKTIVVKNKVEEQNNIFGGPLMVFVNIEGKIV-DSKGAPLPGASVKVKGTTKATT 183
             +  +   I V N++        G + +   + G++  +++   +PG +++VKG    T 
Sbjct: 108  KFQQINHVINVNNRLSSDTE---GVVRIKRVVTGQVTSENEPMGIPGVTIRVKGGNTGTV 164

Query: 184  ANTEGKFSL-VADKNDVLLISFVGYKTKEVPLNGQSTLTIQLEESAAELSDFVVVGYGST 242
             + +GKFS+ V+D++ +L+IS +GYKT+E+ +  Q+ L +QL+E    L + VVVGYG+ 
Sbjct: 165  TDIDGKFSIEVSDEDAILVISSIGYKTQELAVGNQTVLNVQLDEDTKALDEVVVVGYGTQ 224

Query: 243  KKVNLTGAVSTVSGDVLKDRPISNIAQGLQGVIPNLTITNFSGQPGRTSDLNIRGYESIN 302
            KKVNLTGAVS VS D+L++RP++NI Q LQG I NL +   +G P      N+RG  S +
Sbjct: 225  KKVNLTGAVSQVSSDMLENRPVANIGQALQGTIANLNVGISNGAPNTNPSFNVRGGTSFS 284

Query: 303  GG-----SPLIVIDGVPTTSNSSLYSLNPQDVENITVLKDAASAAIYGGRATFGVILITT 357
            GG     SPLI++DGV    N     LNP+D+E+++VLKDAASAAIYG RA +GV+L+TT
Sbjct: 285  GGDFQTGSPLILVDGVEMDINQ----LNPEDIESVSVLKDAASAAIYGSRAAYGVMLVTT 340

Query: 358  KSGKFNSGLNIEFSSNFSDKRLTELPNIVTDPATVMRVKNEGYKAYYGTDLYN-QTFMDY 416
            K G    G  I +S++F   + + +P+++ D  T+     +  +    T   + Q  ++ 
Sbjct: 341  KKGAKQEGTKISYSNSFQWNKPSAVPDLL-DAYTIQEAAIKAEELQNRTPSSDMQLKLEN 399

Query: 417  ANKRSADPSLP-PYYIDPADPTKYVYVGSTNWFDELFRKNTPTWDNNLSIRGGTEKVTYN 475
              +  ++P    PYY+D  D    ++VG+T  ++E  R  +P   +NL++ GGT+K +Y 
Sbjct: 400  IQRYMSNPDAELPYYMDAGD--NIIWVGNTRPYEEALRNYSPMQKHNLNLSGGTKKSSYY 457

Query: 476  VSAGYLRQEGLFEGNPDVYSRYSLRSKTEFKATSWLKLGNTTQLSRTGYKYPTLWNGPSR 535
             S GY  Q+GL++ N D + RY+L      + T W ++   +  S++ Y  P    G  +
Sbjct: 458  ASLGYQGQDGLYKINTDKFKRYNLMLNVNNEVTDWFEVEFRSSYSQSNYTEPVSPAG--K 515

Query: 536  GDLFHAIGRIPSFEI-------VNNPNGS-YTANGVLLGYLKDGGRGESQKNDYLTTFEA 587
            G  + A+ + PS  I        ++P G  YT N  +L ++  G R +  K   L     
Sbjct: 516  GGWWTAMSQEPSRNINMPIMTPASSPVGQMYTDN--ILSFMDYGSRNDETKEHILLGIAP 573

Query: 588  QTNFFKNSLRVTTNYTFQSVN---GNFLDPYIPLEYQYANPNVNIQDGQSGLGQGYNTSK 644
              +  K    V  N +++S N      +     +E ++ +P   +    S + +    S 
Sbjct: 574  TIHVLKG-WDVKANISYKSYNFRRKQVIPELERIENRWDSPTT-VHTNPSSVQRWSQHSD 631

Query: 645  YNVFNVFGEYEKNFGKHNVKAMAGYSQEGYHEDSNSIFRNDLISSNTPNIGLALGNPSYT 704
                N+F +Y  +  KH    + G++QE Y           +++   P IG  LGN    
Sbjct: 632  QFTINLFTDYSLSVDKHEFYVLGGFNQESYKYSYLGGRGEQILTPYVPVIGQTLGNEYAY 691

Query: 705  STAGEWALRSQFFRVNYAYDNKYLLEVNGRRDGSSRFPVDDRYVFLPSGSIGWRVSEENF 764
             +  EWALR  F+R  Y YDN+YLLE NGR DG+SRFP D R+ F PS S  WR+SEE +
Sbjct: 692  DSESEWALRGAFYRFTYNYDNRYLLESNGRYDGTSRFPSDRRFKFFPSLSGAWRISEEEW 751

Query: 765  FKGLKPAISDFKLRFSYGSLGNQTVSKAGSSDPDYYPYIPLMSSSSKITNILGGNQPPAV 824
              GL+P +++ KLR SYGSLGNQ VS         Y YIP   ++++++ +  G +P  +
Sbjct: 752  AAGLRPFVNELKLRASYGSLGNQNVSN--------YIYIPSYGTTAQVSYLFDGIRPVGI 803

Query: 825  YAPGLVSPSLTWERQYTKNWGTDIALMGNKLNISYDYYIRDVKDMLTSSRQLPAVLGTPP 884
              PGLV+  LTWE   T + G D+AL  +KL++S+D+Y R   D+L +  + PAVLGT  
Sbjct: 804  TPPGLVNADLTWETATTVDVGFDVALF-DKLDVSFDWYERTTSDILVAGDKYPAVLGTSS 862

Query: 885  PRTNAADLRTRGWELSLNYNNKFNLASSDFKYNFRFVLADNYTVITKFD-NPNGNIGEYY 943
            P  N+ +++T GWEL+  +    ++  +  +Y+  F L+D  + IT+F+ NPN  +   Y
Sbjct: 863  PTKNSGEMKTTGWELTAKWR---DVLDNGIRYDMSFNLSDYRSEITEFNGNPNKLLSSLY 919

Query: 944  VGKRIGEIWGMETEGLFQSDAEVAAHADQSAVDGYYGFHAGDPKYRDLNGDGKINIGKLT 1003
             G+ +GEIWG ET GLFQS  ++     Q  ++    F  GD +YRDL+GDG++  G+ T
Sbjct: 920  TGQVMGEIWGYETVGLFQSQEQIDNAPSQELINSGLWF-PGDVQYRDLDGDGQVGPGEST 978

Query: 1004 LGDHGDLKVIGNREARYTYGISGGFNWKGFDMSFFLQGVAKRDFWLGTSSYFWGTYRAPW 1063
            + + GD K+IGN   RY +G++    WKGFD++ F+QGV KRD W+G S+ FWG   A  
Sbjct: 979  VENSGDRKIIGNSTPRYQFGLNMNVFWKGFDLNVFIQGVGKRDVWIG-SNLFWGGI-AGG 1036

Query: 1064 EHVYQHQLDNMWSPENPDAYFPRYAAWRTGDIAEWRDLDVVQTRYLQDASYLRLKNLTIG 1123
               Y+   D+ W+PE  DAYFP Y +               QTRYLQ+ASYLRLKN+T+G
Sbjct: 1037 SGTYEVYEDS-WTPERTDAYFPGYRSSSAN--------RQTQTRYLQNASYLRLKNITLG 1087

Query: 1124 YRLPEKLVKRIGLKSFRFYLSGENIGEINNIKFKVLDPETLGGDGSSSWGTGKSYPFQRS 1183
            Y LP    +RI L   R Y S  NI E  ++     DPE L G          +YP  RS
Sbjct: 1088 YTLPAPWTERIRLDKVRVYTSAYNIWEATSVP-DTFDPEVLSG----------NYPMLRS 1136

Query: 1184 YSAGINVT 1191
             +AG+ +T
Sbjct: 1137 IAAGLQIT 1144