Pairwise Alignments

Query, 1192 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1149 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  520 bits (1339), Expect = e-151
 Identities = 386/1206 (32%), Positives = 600/1206 (49%), Gaps = 100/1206 (8%)

Query: 28   MGIDLDKKRRFIMRIKLTALICF-ITCLHIYAAGYGQ----------SITLSVKNASLQL 76
            M I L  K +F+  + LT LI       H YA               +++L +KNA++  
Sbjct: 1    MKIHLLSKMKFVGILVLTLLIGLGDISAHQYALANSSWKRNQRLEDVNVSLKMKNANMIQ 60

Query: 77   VLDKIEKQSGYNLWVQTELLKKSNKVSLAVKNKPLDAVLKDVFKDQTLSYAIVGKTIVVK 136
            VL KIE  +G+++      L  +  ++L VK + L  +L+ + +D  + +  V  TI  +
Sbjct: 61   VLKKIESVTGFHVAFMEGDLSTAQNITLDVKQQSLLHLLETLSRDYNVHFTQVNNTIHAR 120

Query: 137  NKVEEQNNIFGGPLMVFVNIEGKIVDSKGAPLPGASVKVKGTTKATTANTEGKFSLVADK 196
             K E    I  G L    +I GK++D +G P+PG +V VKGT K T  + +G F+     
Sbjct: 121  PKEEM---IPVGSLEER-SISGKVLDEEGIPIPGVNVIVKGTKKVTVTDLDGVFAFDNIA 176

Query: 197  ND-VLLISFVGYKTKEVPLNGQSTLTIQLEESAAELSDFVVVGYGSTKKVNLTGAVSTVS 255
             D VL+ +F+G++++E+ +  + T+++ L E   +L + VVVGYG+ KK NLTGAVSTV 
Sbjct: 177  EDAVLVFTFIGFESQEISVTNKETISVTLLEDIGDLEEVVVVGYGTQKKANLTGAVSTVE 236

Query: 256  GDVLKDRPISNIAQGLQGVIPNLTITNFSGQPGRTS-DLNIRGYESINGG-SPLIVIDGV 313
               L++RP++N+A  LQG  P L IT   GQPG  +  + +RG  S NG   PL+++DGV
Sbjct: 237  AKALENRPVTNVANALQGTTPGLNITRTGGQPGNENVGIQVRGVTSANGAVDPLLMVDGV 296

Query: 314  PTTSNSSLYSLNPQDVENITVLKDAASAAIYGGRATFGVILITTKSGKFNSGLNIEFSSN 373
            P+    +L ++NP D+E++TVLKDAA+AAIYG +A  GVIL+ TK+GK       E+S+ 
Sbjct: 297  PSPL-FTLQTINPNDIESVTVLKDAAAAAIYGAQAAGGVILVKTKAGK-TGKTTFEYSNQ 354

Query: 374  FSDKRLTELPNIVTDPATVMRVKNEGYKAYYGTDLYNQTFMDYANKRSADPSLPPYYIDP 433
            F  +    +P  ++     +        A  G + YN+  + Y   R     +P      
Sbjct: 355  FGTEWALNVPERLSLLDEALYSNLARANAGLGPE-YNEQALQYI--RDGVEFVP----SE 407

Query: 434  ADPTKYVYVGSTNWFDELFRKNTPTWDNNLSIRGGTEKVTYNVSAGYLRQEGLFEGNPDV 493
             +  ++V     +  +++ RK +P   +NLS RGGTE V Y VS GY  ++G+F+  PD 
Sbjct: 408  TNENRWVTYNQQSIREQVLRKTSPMQTHNLSARGGTESVNYLVSLGYYDKKGVFKIGPDS 467

Query: 494  YSRYSLRSKTEFKATSWLKLGNTTQLSRTGYKYPTLWNGPSRGDL----FHAIGRIPSFE 549
            + RY+ R     K T  L L +    +    K P++  G S   L    + A  R P F 
Sbjct: 468  FERYNARFNLGAKLTKHLSLDSRISYANHFTKAPSI--GASGYGLLQQVYQARQRFPIFM 525

Query: 550  IVNNP-NGSYTANGVLLGYLKDGGRGESQKNDYLTTFEAQTNFFKNSLRVTTNYTFQSVN 608
                   G+ T+     GYL  GG   +Q+ND+   F   T   K+   V    T +S+ 
Sbjct: 526  PDGRLFGGAGTSGNNTYGYLSQGGYNNTQRNDFDGVF---TGTLKD---VVKGLTIRSIF 579

Query: 609  GNFLDPYIPLEYQYANPNVNIQDGQSGLGQGY---NTSKYNV---------FNVFGEYEK 656
            G     Y   + +     V + D + G    Y   N + Y +         F +  +Y+ 
Sbjct: 580  GR---QYRRADRERFARTVELWD-RGGDSPAYILNNPNAYELTQDNTINTSFQMLVDYDL 635

Query: 657  NFG-KHNVKAMAGYSQEGYHEDSNSIFRNDLISSNTPNIGLALGNPSYTS-TAGEWALRS 714
                KH    +AGY  E Y         N+LI+++ P + L   N   T+ +   +A +S
Sbjct: 636  TIAEKHAFHVLAGYQWEDYRWTRLYSRANNLINNDLPTLNLGDDNTKVTNQSINTYANQS 695

Query: 715  QFFRVNYAYDNKYLLEVNGRRDGSSRFPVDDRYVFLPSGSIGWRVSEENFFKGLKPAISD 774
             F R+NY++D+++L E   R D SSR     R    P+ S+GW +  E+FF    P  S+
Sbjct: 696  VFGRINYSFDDRFLFEGTIRMDESSRLAPGLRTKVFPAASVGWNMHREDFFAEALPFFSE 755

Query: 775  FKLRFSYGSLGNQTVSKAGSSDPDYYPYIPLMSSSSKITNILGGNQPPAV--YAPGLVSP 832
            FKLR S+G LG    S  G     YY Y+ ++S  S +  ++G ++  +   Y   + S 
Sbjct: 756  FKLRGSWGQLG----SALGGDIIGYYDYLNVLSRGSGL--VMGSDETRSTYFYQSSVPSS 809

Query: 833  SLTWERQYTKNWGTDIALMGNKLNISYDYYIRDVKDMLTSSRQLPAVLGTPPPRTNAADL 892
             L+WE   T N G D+ L+ NKL +S+DYY++  ++MLT   QLP   G   P+ N   L
Sbjct: 810  ELSWETIETWNGGVDLGLLENKLQMSFDYYVKHNRNMLT-PLQLPGTFGVGTPKINNGVL 868

Query: 893  RTRGWELSLNYNNKFNLASSDFKYNFRFVLADNYTVITKFDNPN----GNIGEYYVGKRI 948
            ++ GWEL++NY ++ N    +F YN  F ++DN   + ++   N    GN      G  +
Sbjct: 869  KSWGWELAVNYRDRVN---ENFNYNIGFNISDNQNELIEYSGRNVVGAGN-NNIIEGFPL 924

Query: 949  GEIWGMET-EGLFQSDAEVAAHADQSAVDGYYGFHAGDPKYRDLNGDGKINIGKLTLGDH 1007
              IWG ET  G F S  +V     Q    G      GD +Y + +GD +I +G+ T  D 
Sbjct: 925  NTIWGYETVPGYFSSADQVDGAPFQDNRTG-----PGDIQYVNQDGDDRITVGRGTTDDS 979

Query: 1008 GDLKVIGNREARYTYGISGGFNWKGFDMSFFLQGVAKRDFWLGTSSYFWGTYRAPWEHVY 1067
            GDL ++G  + RY +G++    WK FD S F QGV KR F + T        ++ +  + 
Sbjct: 980  GDLVLLGANQQRYLFGMTASAQWKNFDFSVFFQGVGKRSF-MPTRDMIMPLSQSWFMPMK 1038

Query: 1068 QHQLDNMWSPENPDAYFPRYAAWRTGDIAEWRDLDVVQTRYLQDASYLRLKNLTIGYRLP 1127
             HQ  + W+PENPDA FPR                +   R++ D SY+RLKN  +GY LP
Sbjct: 1039 HHQ--DYWTPENPDAEFPR-------PFLNGHHNYLPSDRWVLDGSYIRLKNFQVGYSLP 1089

Query: 1128 EKLVKRIGLKSFRFYLSGENIGEINNIKF--KVLDPETLGGDGSSSWGTGKSYPFQRSYS 1185
              LV R+ +   R +++G+++     +     V DPE       +S      YPF  + +
Sbjct: 1090 ATLVSRVKVNRARVFITGQDVLTFTKMGVFNGVFDPE-------NSNNVRADYPFFGTLA 1142

Query: 1186 AGINVT 1191
             G+N++
Sbjct: 1143 IGLNLS 1148