Pairwise Alignments

Query, 1192 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1160 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  642 bits (1657), Expect = 0.0
 Identities = 409/1151 (35%), Positives = 624/1151 (54%), Gaps = 59/1151 (5%)

Query: 65   ITLSVKNASLQLVLDKIEKQSGYNLWVQTELLKKSNKVSLAVKNKPLDAVLKDVFKDQTL 124
            + L +   SL  VL +IE +S ++ +   + +    +V LAV    +  +L+D+ +   L
Sbjct: 46   VKLEMSEGSLSKVLSEIEAKSAFHFFFTDKSVDTEEQVKLAVSEGTVAEILRDIAEKSQL 105

Query: 125  SYAIVGKTIVVKNKVEEQNNIFGGPLMVFVNIEGKIV-DSKGAPLPGASVKVKGTTKATT 183
             +  V +TI V N+        G   ++   + G++  +++ A +PG +V +KGTT+ T 
Sbjct: 106  KFKQVNETISV-NRAAYSKRKDGREEVIDKTVTGRVTSENEPAGIPGINVVLKGTTRGTV 164

Query: 184  ANTEGKFSL-VADKNDVLLISFVGYKTKEVPLNGQSTLTIQLEESAAELSDFVVVGYGST 242
             + +GKF+L V D+  VL+ S +GY ++EV +  +  L + +EE  + L++ VVVG+GS 
Sbjct: 165  TDIDGKFTLSVPDEGAVLVFSSIGYVSQEVSVGTRLVLNVSMEEEVSALNEVVVVGFGSK 224

Query: 243  KKVNLTGAVSTVSGD-VLKDRPISNIAQGLQGVIPNLTITNFSGQPGRTSDLNIRGYESI 301
            ++ ++TGAV+TV  D VL DRP+++ A+ LQG +P L IT  SGQPG  + L IRG+ESI
Sbjct: 225  EREDITGAVTTVKMDKVLGDRPVTDAAKALQGSVPGLQITYGSGQPGSGTSLQIRGFESI 284

Query: 302  NGGSPLIVIDGVPTTSNSSLYSLNPQDVENITVLKDAASAAIYGGRATFGVILITTKSGK 361
            NGGSPL+++D VP     SL  +NP+D+E++ VLKDA++A+IYG  A FGVILITTKSG 
Sbjct: 285  NGGSPLVLVDNVPM----SLDDVNPRDIESVNVLKDASAASIYGAEAAFGVILITTKSGG 340

Query: 362  FNSGLNIEFSSNFSDKRLTELPNIVTDPATVMRVKNEGYKAYY-GTDLYNQTFMDYANKR 420
             N  + +E+S+NF   R + LP   +       +K+ G + Y+ G D+   +++ Y N+ 
Sbjct: 341  KNQPMKLEYSNNFGFTRPSTLPEKASPLEFTSALKSWGQQTYWTGQDV--DSWIGYINEY 398

Query: 421  SADPSL-PPYYIDPADPTKYVYVGSTNWFDELFRKNTPTWDNNLSIRGGTEKVTYNVSAG 479
            +A+PS  P  YI      +Y YV   + + E    +     +NLS+ GG +K +Y VS G
Sbjct: 399  NANPSAYPDGYITDDSGLRY-YVRENDLYGEFLGASGFEQIHNLSVTGGGDKTSYRVSLG 457

Query: 480  YLRQEGLFEGNPDVYSRYSLRSKTEFKATSWLKLGNTTQLSRTGYKYPTLWNGPSRGDLF 539
            Y  ++G+   + D Y+RY++      + +  L     T    + YK   L  GP  G   
Sbjct: 458  YNDEDGIMVTDKDSYTRYNVNLNLTTEISPKL-----TTTFNSFYKNG-LRTGPVSGSWS 511

Query: 540  HAIGRIPSFEIVNNPNGSYTANGVLLGYLKDGGRGE----SQKNDYLTTFEAQTNFFK-N 594
                   ++     P G    +G  L +       +     +  D L  F  + +F    
Sbjct: 512  SMYYSAINYHSAT-PIGMGEIDGERLPFETPANLIKYSPMRENYDELIRFFGRASFKPIE 570

Query: 595  SLRVTTNYTFQSVNGNFLDP-YIPLEYQYANPNVN-IQDGQSGLGQGYNTSKYNVFNVFG 652
             L +   YTF+       DP Y P     A   +   Q  QS          Y+  N++G
Sbjct: 571  GLEINGEYTFEKKREEVQDPSYTPTLINPATLAIAPYQPSQSSYFTNTWKRNYHAVNLYG 630

Query: 653  EYEKNFGKHNVKAMAGYSQEGYHEDSNSIFRNDLISSNTPNIGLALGNPSYTSTAGEWAL 712
            +Y+K  G H++  MAG +Q+    +S S  R  LIS +TP +  A G  +      ++ +
Sbjct: 631  KYDKEIGSHDLHFMAGMNQQVSVAESFSASRQMLISPDTPGLSTATGVINVNDGYTDYGI 690

Query: 713  RSQFFRVNYAYDNKYLLEVNGRRDGSSRFPVDDRYVFLPSGSIGWRVSEENFFKGLKPAI 772
               F RV+Y+  ++YLLE+NGR DGSSRFP  DR+ F PS +  W+VS E F  G+  AI
Sbjct: 691  IGFFGRVDYSLKDRYLLELNGRYDGSSRFPKGDRFGFFPSVAAAWKVSSEPFMAGIAQAI 750

Query: 773  SDFKLRFSYGSLGNQTVSKAGSSDPDYYPYIPLMSS-SSKITNILGGNQPPAVYAPGLVS 831
            ++ KLR S+G +GNQ + +A  +    YPY+P MS+ ++   ++  G +  ++ +P LVS
Sbjct: 751  TNLKLRASWGEIGNQAIERAWGN----YPYLPTMSTYNAPWIDVSSGVRAVSLSSPDLVS 806

Query: 832  PSLTWERQYTKNWGTDIALMGNKLNISYDYYIRDVKDMLTSSRQLPAVLGTPPPRTNAAD 891
             S TWER  T N G D  L  NKL  ++D+Y R   DML    QLP+VLG   P  N AD
Sbjct: 807  ASYTWERVRTLNLGVDFGLFDNKLYTAFDWYNRQTLDMLAPGSQLPSVLGASAPLQNVAD 866

Query: 892  LRTRGWELSLNYNNKFNLASSDFKYNFRFVLADNYTVITKFDNPNGNIGEYYVGKRIGEI 951
            L+T GWEL + +         DF Y+  F L DN T IT F N  G I ++YVG+++ EI
Sbjct: 867  LKTVGWELDVKWREDL----GDFDYSLGFNLYDNSTEITSFQNEAGLINQFYVGQKMNEI 922

Query: 952  WGMETEGLFQSDAEVAAHADQSAVDG--------YYGF--HAGDPKYRDLNGDGKINIGK 1001
            WG  T G +  D  V    D + ++G        Y G   + GD KY DLNGDG+I  G 
Sbjct: 923  WGFTTAGYYTVDDFVDGSLDDNLMNGQLIEGVPSYRGVNQNPGDVKYADLNGDGEIFTGN 982

Query: 1002 LTLGDHGDLKVIGNREARYTYGISGGFNWKGFDMSFFLQGVAKRDFWLGTSSYFWGTYRA 1061
             TL D GD  +IGN   R+ +G++G  ++K FD S FL+G+ KRD W+     F   Y  
Sbjct: 983  GTLSDPGDRSIIGNSTRRFEFGLNGSASYKNFDFSLFLRGIGKRDVWISNPVVF--PYTF 1040

Query: 1062 PWEHVYQHQLDNMWSPENPDAYFPRYAAWRTGDIAEWRDLDVVQTRYLQDASYLRLKNLT 1121
             +  +Y+HQLD  W+PEN DA++PR      G+   +      QT+YL   +YLR++N+T
Sbjct: 1041 EFTTIYKHQLD-YWTPENTDAFYPRNYPNGGGN---YGGSLRTQTKYLYSGAYLRVQNIT 1096

Query: 1122 IGYRLPEKLVKRIGLKSFRFYLSGENIGEINNIKFKVLDPETLGGDGSSSWGTGKSYPFQ 1181
            +GY   E L+ ++ +   R Y+SGEN+   +++      P+ L  D  ++   G +YPF 
Sbjct: 1097 LGYSFNESLLDKLKINRLRVYMSGENLFNFDDL------PDGLNAD-LTNVSQGGNYPFI 1149

Query: 1182 RSYSAGINVTL 1192
            +  S G+NVTL
Sbjct: 1150 KKVSIGLNVTL 1160