Pairwise Alignments

Query, 1192 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1086 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  570 bits (1469), Expect = e-166
 Identities = 380/1100 (34%), Positives = 566/1100 (51%), Gaps = 103/1100 (9%)

Query: 154  VNIEGKIVDSK-GAPLPGASVKVKGTTKATTANTEGKFSLVADKNDVLLISFVGYKTKEV 212
            V + G +  ++ G  LPGAS+ VKGTT+  T + EG + + A+K ++L+ SF+G   +E 
Sbjct: 29   VTVRGTVSSAEDGVTLPGASILVKGTTRGVTTDVEGNYQIQAEKGEILVFSFIGMVAQER 88

Query: 213  PLNGQSTLTIQLEESAAELSDFVVVGYGSTKKVNLTGAVSTVSGDVLKDRPISNIAQGLQ 272
             ++ QST+ + LE  A  L + VVVGYG+ K+ +LTGAVSTV  +VL+ RPI+++ +GLQ
Sbjct: 89   EVDDQSTINVALEAEAKSLEEVVVVGYGTQKRSDLTGAVSTVDTEVLESRPITDVGRGLQ 148

Query: 273  GVIPNLTITNFSGQPGRTSDLNIRGY----ESINGGSPLIVIDGVPTTSNSSLYSLNPQD 328
            G  P LTIT  SGQ G+   + +RG      +  G  PLI++D V   +   L  +NP+D
Sbjct: 149  GTTPGLTITTPSGQIGQNPSIRLRGMTGTLSNSGGAQPLILVDNVEVPN---LQLINPED 205

Query: 329  VENITVLKDAASAAIYGGRATFGVILITTKSGKFNSGLNIEFSSNFSDKRLTELPNIVTD 388
            +E+I+VLKDAASA+IYG R  +GVILITTKSGK      + +S+NFS    T+ P I   
Sbjct: 206  IESISVLKDAASASIYGSRGAWGVILITTKSGKKGEAPKVSYSNNFSWATPTKTPVI--- 262

Query: 389  PATVMRVKNEGYKAYYGTDLYNQTF-------------------MDYANKRSADPSLPPY 429
             A+        + A   T+L    F                     Y  +   +  +   
Sbjct: 263  -ASAAEGAEMAFSALQRTNLSTNVFGVVGMYFDQEGIQKMREWEQQYGGQDLGNEMVLGR 321

Query: 430  YIDPADPTKYVYVGSTNWF--DELFRKNTPTWDNNLSIRGGTEKVTYNVSAGYLRQEGLF 487
              +  D   + Y     W   D   R  TP   +++S+ GG++K TY +  GYL Q G+ 
Sbjct: 322  DFEIRDGRLFFY---RPWDAGDMFMRDWTPQQKHDVSVAGGSDKTTYRLGVGYLGQNGVL 378

Query: 488  EGNPDVYSRYSLRSKTEFKATSWLKLGNTTQLSRTGYKYPTLWNGPSRGDLFHAIGRIPS 547
            + NPD ++RYS+        T W+ +      S+T +  P  ++  +  D ++ + R P 
Sbjct: 379  KVNPDEFNRYSVDLSVNTAVTDWMDVRGKVLYSKTKFTRPFYFSSETY-DPWYYLFRWPK 437

Query: 548  FEIVNNPNGSYTANGVLLGYLKDGGRGESQKNDYLTTFEAQTNFFK-NSLRVTTNYTFQS 606
                  P G+Y          +      +++   ++     T       L +  NYTF S
Sbjct: 438  ----TYPYGTYEGYPFRSAVTEVTQAKMNEETTSMSRINLGTTIRPVEGLSIDANYTFDS 493

Query: 607  VN------GNFLDPY------IPLEYQ-YANPNVNIQDGQSGLGQGYNTSKYNVFNVFGE 653
             N      G  +  Y        LEY  Y++ + N  + +S      + S  NV  +F  
Sbjct: 494  NNFHDHRTGGVISAYNFWATGADLEYAPYSSASYNRVEYRS------SWSNRNVGKLFAT 547

Query: 654  YEKNFGKHNVKAMAGYSQEGYHEDSNSIFRNDLISSNTPNIGLALGNPSYTSTAGEWALR 713
            YEK+ G H +K MAG   E Y     S  R DL+  +   + LA G+     +  +W+  
Sbjct: 548  YEKSAGDHEMKFMAGGDIEAYEYWYQSSQRRDLMDLDRGELDLASGDQFVDGSRNQWSTM 607

Query: 714  SQFFRVNYAYDNKYLLEVNGRRDGSSRFPVDDRYVFLPSGSIGWRVSEENFFKGLKPAIS 773
              F R+NY Y  KY LE+NGR DGSSR    DR+ F PS S G+ ++EE F + +   +S
Sbjct: 608  GVFGRINYNYMQKYFLELNGRYDGSSRLSPTDRWAFFPSMSAGYVITEEPFMEPVTNVMS 667

Query: 774  DFKLRFSYGSLGNQTVSKAGSSDPDYYPYIPLMSSSSKITNILGGNQPPAVYAPGLVSPS 833
              KLR S+G++GNQ           Y   I  + +S     ++G +       PG +  S
Sbjct: 668  FMKLRASWGAIGNQNA---------YLSDIYRIMNSYSSGWLVGSDNQLTFGTPGALPSS 718

Query: 834  LTWERQYTKNWGTDIALMGNKLNISYDYYIRDVKDMLTSSRQLPAVLGTPPPRTNAADLR 893
            LTWE   T ++G D     +KL +++D+Y R   DM ++   LPA  GT   + N  +L 
Sbjct: 719  LTWETVTTLDFGFDSRFFQDKLGVTFDWYRRTTSDMHSAGEVLPASYGTSATKQNLGELE 778

Query: 894  TRGWELSLNYNNKFNLASSDFKYNFRFVLADNYTVITKFDNPNGNIGEYYVGKRIGEIWG 953
            T GWEL+++Y++ F   S+ F  +   +L+D    IT+F + N +I     G+ +GEIWG
Sbjct: 779  TTGWELAVDYSHSF---SNGFNLHATAMLSDFKERITEFAD-NTSIYANRKGRVLGEIWG 834

Query: 954  METEGLFQSD-----------AEVAAHADQSAV-------DGYYGFHAGDPKYRDLNGDG 995
             ET+ LF +D            E   +  +  +        G++ +  GD KY+DLNGDG
Sbjct: 835  YETDRLFTNDDFVQDANGELITENGKYVLKEGIPSQSLYESGWFFYGPGDVKYKDLNGDG 894

Query: 996  KINIGKLTLGDHGDLKVIGNREARYTYGISGGFNWKGFDMSFFLQGVAKRDFWLGTSSYF 1055
            +I  G  T+ DHGDLKVIGN   RY YG   G ++KG D SFF+QGV KRD+W     + 
Sbjct: 895  EITYGSNTVEDHGDLKVIGNSTPRYQYGFRLGGDYKGIDFSFFIQGVGKRDYWANGPIFV 954

Query: 1056 WGTYRAPWEHVYQHQLDNMWSPENPDAYFPRYAAWRTGDIAEWRDLDVVQTRYLQDASYL 1115
             G YR P E  + HQ D  W+PENPDA++PR      G  +  R+  + QTRYL D SY+
Sbjct: 955  PG-YR-PGEAWFAHQQD-YWTPENPDAFYPR--PTDAGQSSNSRNF-LRQTRYLLDMSYM 1008

Query: 1116 RLKNLTIGYRLPEKLVKRIGLKSFRFYLSGENIGEINNIKFKVLDPE---TLGGDGSSSW 1172
            R+KN+TIGY LP+ ++ ++ +   R Y SGEN+ E +N+   + DPE   T  G   S+ 
Sbjct: 1009 RMKNITIGYSLPQSVIGKLNIDKVRVYFSGENLFEFDNLDLPI-DPEVDYTSSGLNDSN- 1066

Query: 1173 GTGKSYPFQRSYSAGINVTL 1192
              G+ YP+ R+ S G+ VTL
Sbjct: 1067 TFGRVYPYSRNISFGLQVTL 1086