Pairwise Alignments

Query, 190 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 194 a.a., sigma-70 family RNA polymerase sigma factor from Phocaeicola dorei CL03T12C01

 Score = 70.1 bits (170), Expect = 2e-17
 Identities = 55/184 (29%), Positives = 94/184 (51%), Gaps = 9/184 (4%)

Query: 11  DAELLALISVSDNLAFNELYDRYWKQVFNAAYKQIKDISSAQDITQDIFTQLWLRDKDSK 70
           D  +LAL + +   AF  LYD Y+  +   + +      +++DI Q++F   W ++  + 
Sbjct: 15  DERILALFAENKEKAFRLLYDTYYLPLCLYSVQFTGSTETSEDIVQNLFVSFWDKNSHTT 74

Query: 71  I-ENLSAYLFTAVRNQSYKLMAKQKRSSPILDVLME---SEVSCYQADDQILYKEFLCAY 126
           I  NL A+LF AVR  S   + +++  S  LD + E   S +  +  ++++L K      
Sbjct: 75  ISSNLHAWLFNAVRFSSLTKVQRERYFS--LDEMEEESYSPIDDFYDEEELLQKRNQLLT 132

Query: 127 EALIDNLPEQQKIIFKKRFNQGLNTLEISTQLCLSPKTVRNHLGRALAKLKTALLI-ILV 185
           E  +  LPEQ+  +  K   +     E++ +L +S  TV+ HL RAL  L+   +I IL+
Sbjct: 133 E--LKKLPEQEYNVLVKIVLEDKKYKEVAEELHISVNTVKTHLSRALKMLRRFNMIEILI 190

Query: 186 LFML 189
           LF L
Sbjct: 191 LFNL 194