Pairwise Alignments

Query, 190 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 200 a.a., RNA polymerase sigma-70 factor from Phocaeicola dorei CL03T12C01

 Score = 88.6 bits (218), Expect = 7e-23
 Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 2/173 (1%)

Query: 11  DAELLALISVSDNLAFNELYDRYWKQVFNAAYKQIKDISSAQDITQDIFTQLWLRDKDSK 70
           + EL+  +   D +AF+ L+  Y  QV       +KD   A+DITQDIF  +W + +D +
Sbjct: 8   ERELIRKLINGDKIAFSHLFSFYKSQVLYYCVHFVKDKEIAEDITQDIFLTVWEKKEDIR 67

Query: 71  IE-NLSAYLFTAVRNQSYKLMAKQKRSSPILDVLMESEVSCYQADDQILYKEFLCAYEA- 128
           IE + SA+L+T  RN+ Y +       S + + LME  +      ++ L ++ +    A 
Sbjct: 68  IEQSFSAFLYTIARNRIYDIFRSLSARSVLYEKLMEQAIDYVDDVEKSLEEKNIQELIAQ 127

Query: 129 LIDNLPEQQKIIFKKRFNQGLNTLEISTQLCLSPKTVRNHLGRALAKLKTALL 181
            ++ L  +Q+ IF+   N+GL+  EI+ QL LS  TV++H+  AL K++  L+
Sbjct: 128 ALEQLSPRQREIFELSRNRGLSHKEIAEQLGLSVYTVQDHIKNALEKIRVYLI 180