Pairwise Alignments

Query, 288 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 323 a.a., Membrane protein, putative from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  201 bits (512), Expect = 1e-56
 Identities = 125/316 (39%), Positives = 182/316 (57%), Gaps = 39/316 (12%)

Query: 3   SGFFAILDDIGALMDDVAVTAKVAA------------------KKTAGILGDDLAVNAEK 44
           +   A++DDI  ++DDVA+  KVAA                  KKTAG+LGDDLA+NA++
Sbjct: 4   TSLLALIDDIATILDDVALMTKVAARKSAAVADDVAAMTQLAAKKTAGVLGDDLALNAQQ 63

Query: 45  STGFLSSRELPVLWAITKGSFVNKLIIVPIALLLNFFFPVAIKVVLVLGGLYLAYEGVEK 104
            TG  + RELPV+WA+ KGS +NK I+VP AL+++   P AI  +L+LGGL+L +EG EK
Sbjct: 64  VTGVKADRELPVVWAVAKGSLMNKAILVPSALVISVIAPWAITPLLMLGGLFLCFEGAEK 123

Query: 105 IVEYF--------IHRSKPSHVEAKEVIQEGEVAEKAKIKSAIITDFILSIEIVIIALGS 156
           +   F         HR +     A E + +    EK KIK A+ TDFILS EI++I LG+
Sbjct: 124 LWHAFGPHKAEDAAHREELVEAVANENV-DLVAFEKQKIKGAVRTDFILSAEIIVITLGT 182

Query: 157 VLEEKLLIQILTVSAVALLATVGVYGIVAIIVRMDDVGYRLMKASGEKGIFSSIGNLLVR 216
           V    +  +I  +  ++L+ TVGVYG+VA IV++DD+G  L + +       S+G  ++ 
Sbjct: 183 VAAVGMGQRIAVLVGISLIMTVGVYGLVAGIVKLDDLGLHLNRQAA--AWKQSLGRGILA 240

Query: 217 SLPVIIKILSVVGTVALILVSGGIFAHNVSFLHHVLHT------WPSILREFAFGLAAGL 270
           + P ++K LS+VGT A+ LV GGI  H +  L H +        W   L     G  AGL
Sbjct: 241 AAPWLMKTLSIVGTAAMFLVGGGILVHGIPALGHGIEAFAATLGWIGSLASSLAGALAGL 300

Query: 271 VA----VLVLTTGKKL 282
           VA    + +++ GK+L
Sbjct: 301 VAGGVVLALVSVGKRL 316