Pairwise Alignments

Query, 299 a.a., ABC transporter permease subunit from Pectobacterium carotovorum WPP14

Subject, 325 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  248 bits (632), Expect = 2e-70
 Identities = 131/283 (46%), Positives = 185/283 (65%), Gaps = 7/283 (2%)

Query: 22  PWRDFVQVFIRNPMALVSSGFVLLLVLVAIFAPWLAPWNPMEPDWASLASPPS---AAHW 78
           P  +F   F  N  A+    F++++V+VA+FAP +AP +P E +      PP+      W
Sbjct: 43  PLAEFWHYFSENKGAVAGLIFIVVIVIVALFAPQVAPHHPYEMNVPMAKMPPAWLEGGQW 102

Query: 79  ---MGTDDLGRDVMSRIIYGARISLYIGIFSVTLGMLVGIVLGLLAGYYGRWVDTLIMRG 135
              +GTD LGRD++SRII+GAR+SL +G   VTL ++ G+ LGLLAG+   WVD +IMR 
Sbjct: 103 SYLLGTDALGRDILSRIIFGARLSLMVGAVVVTLSLVAGVGLGLLAGFLRGWVDIVIMRL 162

Query: 136 SDVLFAFPGMLLAIAVVAILGPGLNNVIIAVAVFSVPVFARIVRASTLSLKQAAYVEAVR 195
            D++ + P +LLAIA+VAILGPGL N + A+AV  +P + R+ RA+ ++     YV A R
Sbjct: 163 MDIILSVPSLLLAIAIVAILGPGLENAMAAIAVVVLPHYTRLTRAAVMTEATKDYVTASR 222

Query: 196 CAGAPDRIVLMRHILPGTLPNVIVYFTMRIGTSILTAAGLSFIGLGPEPDVPEWGNILAM 255
            AGA    ++++ ILP TL  +IV  T+   T+IL AA L F+GLG  P  PEWG +L+ 
Sbjct: 223 VAGASKGRLMVKTILPNTLAPLIVQATLGFSTAILDAAALGFLGLGARPPRPEWGTMLSE 282

Query: 256 SRSLMMAGAWHVSVFPGLAIFFTVLAFNLLGDALRDTLDPKLK 298
           +R  +++  W +  FPGLAI FTVLAFNL+GD LRD LDP++K
Sbjct: 283 AREFVLS-HWWIVTFPGLAILFTVLAFNLMGDGLRDALDPRMK 324