Pairwise Alignments

Query, 299 a.a., ABC transporter permease subunit from Pectobacterium carotovorum WPP14

Subject, 284 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  241 bits (615), Expect = 1e-68
 Identities = 120/275 (43%), Positives = 178/275 (64%), Gaps = 1/275 (0%)

Query: 24  RDFVQVFIRNPMALVSSGFVLLLVLVAIFAPWLAPWNPMEPDWASLASPPSAAHWMGTDD 83
           R ++  + R+PM       VL +   A+ APW+AP +P   +  ++  PPS+AH +GTD 
Sbjct: 10  RRWLLFWTRHPMLATGLSLVLAMSAAALLAPWIAPHDPTALNLTAILQPPSSAHPLGTDA 69

Query: 84  LGRDVMSRIIYGARISLYIGIFSVTLGMLVGIVLGLLAGYYGRWVDTLIMRGSDVLFAFP 143
           LGRDV+SR+++GAR+SL++G  SV + + +G+ LGL AGY+G   D LIMR  D++  FP
Sbjct: 70  LGRDVLSRMLHGARVSLWVGFVSVGISVAIGLALGLAAGYFGGLADELIMRCVDIMLCFP 129

Query: 144 GMLLAIAVVAILGPGLNNVIIAVAVFSVPVFARIVRASTLSLKQAAYVEAVRCAGAPDRI 203
              L +AV+A L P L N++  + + S    AR+VRA TLSL++  ++ A R AGA    
Sbjct: 130 SFFLILAVIAFLEPSLLNIMAVIGLTSWMGVARLVRAETLSLRERDFIAAARLAGAGPVR 189

Query: 204 VLMRHILPGTLPNVIVYFTMRIGTSILTAAGLSFIGLGPEPDVPEWGNILAMSRSLMMAG 263
           +L  H+LP  +  V+V  T+ +  +ILT + LSF+GLG +P +P WGN+L   + ++   
Sbjct: 190 ILCLHVLPNAVAPVLVSATLGVAGAILTESALSFLGLGVQPPMPSWGNMLLEGKDVLEIA 249

Query: 264 AWHVSVFPGLAIFFTVLAFNLLGDALRDTLDPKLK 298
            W +SVFPG AI  TVL +NLLG++LRD LDP+LK
Sbjct: 250 PW-LSVFPGCAILLTVLGYNLLGESLRDLLDPRLK 283