Pairwise Alignments

Query, 371 a.a., LPS export ABC transporter permease LptF from Pectobacterium carotovorum WPP14

Subject, 373 a.a., Predicted permeases from Pseudomonas stutzeri RCH2

 Score =  204 bits (518), Expect = 4e-57
 Identities = 114/370 (30%), Positives = 201/370 (54%), Gaps = 6/370 (1%)

Query: 1   MIIIRYLVRETFKSQLAILFILLLIFFCQKLVRILGAAVDGEIPTNLVISLLGLGVPEMV 60
           MI+ RYL RE   +  A+  +LL+I    + ++ L  A  G +   +++ ++G  +P  +
Sbjct: 1   MIVFRYLSRELLVTMSAVSAVLLVIIMSGRFIKYLAQAAQGVLDPGVLLLIMGFRLPGFL 60

Query: 61  QLILPLSLFLGVLMTFGRLYAESEITVMHACGLGKRVLLKAALVLAVFTAIVATINVMWL 120
           QLILPL LFLG+L+ +GRLY ESE+TV+ A G+ +R LL  ++  A   A +     + L
Sbjct: 61  QLILPLGLFLGILLAYGRLYLESEMTVLSATGMSQRRLLAYSMAPAALVAAMVGWLSLGL 120

Query: 121 SPWSSRHQEEVLAEAKANPGMATLVEGQFQSAQGGNAVLFVGNVKG--SEFEHVFLAQLR 178
           +P      + +L +  +     TLV G+FQ+ +GG+ V +   +    SE   VF+++  
Sbjct: 121 APQGIAEVDRILNQQDSLTEFDTLVPGRFQTLRGGSRVTYTRELSADRSELGGVFISETN 180

Query: 179 PSGNARP----SVVVADRGHIKQNEDGAQVVTLDNGSRYEGTALLRDFRITDFTNYQAVI 234
            S         SV+VA+ G  +   DG++ + L+NG RY+G     D+R   +  Y  ++
Sbjct: 181 VSRQTGKESGLSVLVAESGRQEIQPDGSRYLILENGYRYDGNPGQADYRAIQYDTYGVLL 240

Query: 235 GHQSVTLNNSDVQQMDMQTLWHSDAHDARAEFHWRLTLIISVLIMAMMVVPLSVVNPRQG 294
               V++  S+ + M  + L  SD    + E  WRL+L + V ++ ++ VPL+ VNPRQG
Sbjct: 241 PKPEVSMELSEREAMPTRELVGSDNVRHQTELQWRLSLPLLVFVVTVLAVPLAKVNPRQG 300

Query: 295 RVLSMLPAMLLYLIFFLLQSSLRSNASKGKIDPMVWVWLTNLTYFGIAVMLNLWDTVPMR 354
           R L +LPA+LLY+ +  L  ++R    KG++   + +W  +  +  I +++  W+ + +R
Sbjct: 301 RFLKLLPAILLYMTYLALLIAVRGALDKGRLPMALGLWWVHGLFLAIGLLMLFWEPIRLR 360

Query: 355 KVRARFKPRI 364
             + R +  +
Sbjct: 361 MSKRRMQREV 370