Pairwise Alignments

Query, 371 a.a., LPS export ABC transporter permease LptF from Pectobacterium carotovorum WPP14

Subject, 369 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  246 bits (629), Expect = 5e-70
 Identities = 133/366 (36%), Positives = 218/366 (59%), Gaps = 3/366 (0%)

Query: 1   MIIIRYLVRETFKSQLAILFILLLIFFCQKLVRILGAAVDGEIPTNLVISLLGLGVPEMV 60
           MI+ RYL +E FK+Q+A+L +LL +F  Q  VR+L  A DGE P +LV++LLGL +P + 
Sbjct: 1   MIVFRYLFKEVFKAQIAVLLVLLTVFISQHFVRVLADASDGEFPASLVVTLLGLNLPYLA 60

Query: 61  QLILPLSLFLGVLMTFGRLYAESEITVMHACGLGKRVLLKAALVLAVFTAIVATINVMWL 120
            L+LPLSLFLG+LM  GR+YAE+E+ V H  G+ +  + +  L+LAV   +      +++
Sbjct: 61  VLVLPLSLFLGILMAHGRMYAENEMVVFHGVGVSEWYVTRVTLLLAVLNMLFTGYLSLFV 120

Query: 121 SPWSSRHQEEVLAEAKANPGMATLVEGQFQSAQGGNAVLFVGNV-KGSEFEHVFLAQL-- 177
           +PW+   Q +VL +A++  G+A LV+G+FQ++  G AVLFV  + K +E E VF+AQL  
Sbjct: 121 TPWAEERQNQVLEKAQSEAGLAALVQGRFQTSPDGRAVLFVEKIGKDNELEKVFVAQLPD 180

Query: 178 RPSGNARPSVVVADRGHIKQNEDGAQVVTLDNGSRYEGTALLRDFRITDFTNYQAVIGHQ 237
               + + ++V A  G + ++  GAQ + L++G RY+G+    D+++ +F  Y   I  Q
Sbjct: 181 PDDEHGQINLVSAAGGKVVEDASGAQQLKLNDGVRYQGSPKSLDYQVLEFGGYGMQIKEQ 240

Query: 238 SVTLNNSDVQQMDMQTLWHSDAHDARAEFHWRLTLIISVLIMAMMVVPLSVVNPRQGRVL 297
            V      +  + +  L   +  +A AE HWR+ + +++ +M ++ VP++ VN RQG+  
Sbjct: 241 EVDERRRKMSALPLNQLLDQNTPEAVAELHWRIAIPLAIPLMTLIAVPMARVNVRQGKFA 300

Query: 298 SMLPAMLLYLIFFLLQSSLRSNASKGKIDPMVWVWLTNLTYFGIAVMLNLWDTVPMRKVR 357
            MLPA+LLYL +F L  + R       +   + +W  +L+   + +ML   +     K+ 
Sbjct: 301 KMLPAILLYLGYFGLMVAGRKALEDEVVPAFMGMWWIHLSALVMGIMLLGKERPLGAKLS 360

Query: 358 ARFKPR 363
            RFK R
Sbjct: 361 GRFKRR 366