Pairwise Alignments

Query, 441 a.a., HlyD family efflux transporter periplasmic adaptor subunit from Pectobacterium carotovorum WPP14

Subject, 372 a.a., HlyD family secretion protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 50.1 bits (118), Expect = 1e-10
 Identities = 38/167 (22%), Positives = 75/167 (44%), Gaps = 2/167 (1%)

Query: 204 VIPHQGRVVAAPLDGVIQSFTVLPNQSVRQGEVLVRFDSTTLKAQADVAERALNVAEAEH 263
           V PHQG  +A    GV+ +       ++ + ++LV  D+   KA        L  +EA+ 
Sbjct: 64  VEPHQGVTIANEAAGVVTNIAFENGSNISKDQLLVALDTRVEKANLQAKLVQLPASEADF 123

Query: 264 RASSQRAFQDADSKARLDFLAAQVAQKRAERDYANALLSRAEIRAERDGIAVFADATRWM 323
           +  ++   Q + SK  LD   A+    +A+ +   A + R EIRA   G+    +    +
Sbjct: 124 KRLTRLYAQKSVSKQDLDNAEAKYLALKADIESLEATIGRREIRAPFSGLVGIRNIN--L 181

Query: 324 GKPVRTGERLMELADPALTALRIELDVGDAIQLQQEAPITLFLDSDP 370
           G+ ++ G  ++ L D +   +R  +      ++     I +++D+ P
Sbjct: 182 GEYLQVGSDIVRLEDISTMKIRFTIPQTQLPRVAVGQKIHVYVDAYP 228