Pairwise Alignments

Query, 638 a.a., beta-glucoside-specific PTS transporter subunit IIABC from Pectobacterium carotovorum WPP14

Subject, 481 a.a., PTS N-acetylmuramic acid EIIBC component from Vibrio cholerae E7946 ATCC 55056

 Score =  155 bits (393), Expect = 3e-42
 Identities = 126/479 (26%), Positives = 221/479 (46%), Gaps = 45/479 (9%)

Query: 3   SKVLAENILELVGGETNVSTLVHCATRLRFKIVDHGKVDVAALEALDGVITVINASGQLQ 62
           ++ +   +L LVGG  NV+   +C TRLR  + +    D AAL+ + GV+ V+ +  QLQ
Sbjct: 5   TQTMMAQVLSLVGGSGNVAKCGNCMTRLRLTLNNSALADHAALKKISGVMGVVESDAQLQ 64

Query: 63  VVIGNRVPEVYRAFGSISRLLEDGD---------------GKRQTAESEASTSAMGRLID 107
           +++G    +   A   ++ L+E GD                +++       TSA+ R + 
Sbjct: 65  IILG--PGKAQTAADMMNALIESGDNVAPAVSEADLSTIAAQQKKQMKSKQTSAVQRFLS 122

Query: 108 LVAGIFTPLLGAMAAAGVLKGALSIVIALGWLNTKESTYVI-----LHAASDSLFYFLPM 162
             A IFTPL+    AAG+L G  +++  +  +    S +++     L      LF FL +
Sbjct: 123 KFATIFTPLIPGFIAAGLLLGIATLLEQIYVVGQTPSEFMLDLVAYLKVFGKGLFAFLSI 182

Query: 163 LLAITAARKFETNIFVAVSVAGALVY----PTIQGLFDAGQPVTFFGLPVVMMKYTSSVI 218
           L+   A + F  +      +A   V        +G++       FFG  +       ++I
Sbjct: 183 LIGYNAQQAFGGSGVNGAILASLFVLGYDPEATKGIYSGMS--EFFGFAI---DPRGNII 237

Query: 219 PIIFSVWLMSYIERFLNRHIHESVRNILTPFFLLVLMVPLTLMTIGPIGISASKLIASVF 278
            ++ +  L + +ER +  ++ + +  ILT    L++M  +T + I PIG    K ++ +F
Sbjct: 238 GVLLAAILGAQVERKVREYMPDDLDMILTSVVTLLIMGAVTFLIIMPIGGELFKGMSWLF 297

Query: 279 VSIYEFNPILAGALMAASWQILVIFGVHWGFVTVFINDLSVMGHSYLKAASSPSVFAQSG 338
           +++ + NP L  A++A  + I V+FG+H GFV V+   +   G + L    + +   Q G
Sbjct: 298 LNLND-NP-LGAAILAGLFLISVVFGIHQGFVPVYFALMEAQGFNSLFPILAMAGAGQVG 355

Query: 339 ALLGVMVRT-KDKKLKALAGSTFIASLFGITEPGVYGVTLKLKKPFICAVIAAAIGGAIV 397
           A L +  R  K+  ++       I  + GI EP +YGVTL   KPF+ A I  A GG  +
Sbjct: 356 ASLALYARAKKETTIRTQIKGAIIPGILGIGEPLIYGVTLPRVKPFVTACIGGAAGGFFI 415

Query: 398 GYAKSSAVSMGM------PGLLTLPIFYG-----EGFVGFLIGCAIAFAVSFVLTIIVG 445
           G      + +G+       G++ +P+         G   F+ G  I++ V F  T   G
Sbjct: 416 GLISYLGLPVGLNTVFGPSGVVAIPLMTSADGIFAGMAVFVGGLLISYTVGFAATYFFG 474