Pairwise Alignments

Query, 209 a.a., 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE from Pectobacterium carotovorum WPP14

Subject, 236 a.a., FtsJ-family 23S rRNA methylase from Caulobacter crescentus NA1000

 Score =  139 bits (351), Expect = 3e-38
 Identities = 82/203 (40%), Positives = 114/203 (56%), Gaps = 3/203 (1%)

Query: 6   RSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQGDKLFKPGMTVVDLGAAPGGW 65
           R+ S   WL+   +D +  +A+  G RSRA FK+ EI      F  G  V+DLG APGGW
Sbjct: 35  RTPSQQAWLERQINDPFSAKARALGYRSRAAFKISEIDDKFHFFSKGAKVIDLGCAPGGW 94

Query: 66  SQYVVTQIGGNGRIIACDILPMDPIVGVDFLQGDFRDELVLKALLERVGDSKVQVVMSDM 125
            Q  V +  G   +   D+LP+DP+     L+ DF  +   + LLE +G  +  +VMSDM
Sbjct: 95  LQIAVER--GVTTLAGIDLLPVDPVAPAHLLEMDFTADGAPEKLLELLG-GEPDLVMSDM 151

Query: 126 APNMSGTPAVDIPKSMYLVELALGMCRDVLAPGGSFLVKVFQGEGFDEYLREIRSLFTKV 185
           APN  G    D  + + L+E+A     DVL PGG+F+ K FQG    E + +++  F KV
Sbjct: 152 APNTVGHRETDHLRIVGLIEIAAEFAIDVLKPGGAFVAKAFQGGETAEIIGKLKRHFDKV 211

Query: 186 KIRKPDASRARSREVYIVATGRK 208
           +  KP ASR  S EV++VATG K
Sbjct: 212 QHFKPKASRQDSSEVFLVATGFK 234