Pairwise Alignments

Query, 509 a.a., transcription termination factor NusA from Pectobacterium carotovorum WPP14

Subject, 495 a.a., transcription termination/antitermination protein NusA from Pantoea sp. MT58

 Score =  841 bits (2173), Expect = 0.0
 Identities = 443/507 (87%), Positives = 470/507 (92%), Gaps = 13/507 (2%)

Query: 1   MNKEILAVVEAVSNEKALPREKIFEALETALATATKKKYEQEIDVRVSIDRKTGDFDTFR 60
           MNKEILAVVEAVSNEKALPREKIFEALE+ALATATKKKYEQEI+VRVSIDR++GDFDTFR
Sbjct: 1   MNKEILAVVEAVSNEKALPREKIFEALESALATATKKKYEQEIEVRVSIDRRSGDFDTFR 60

Query: 61  RWLVVNEVTQPTREITLEAAQFEDPALDVGGYVEDQIESVTFDRITTQTAKQVIVQKVRE 120
           RW +V EVTQPTREITL+AA+FED A ++G YVEDQIESVTFDRITTQTAKQVIVQKVRE
Sbjct: 61  RWEIVEEVTQPTREITLDAARFEDEAFNLGEYVEDQIESVTFDRITTQTAKQVIVQKVRE 120

Query: 121 AERAMVVDQFREQEGEIITGVVKKVNRDNISLEVRPIDGSNTSAEAVIGREDMLPRENFR 180
           AERAMVVDQFREQEGEIITGVVKKVNRDNISL++    GSN  AEAVI REDMLPRENFR
Sbjct: 121 AERAMVVDQFREQEGEIITGVVKKVNRDNISLDL----GSN--AEAVILREDMLPRENFR 174

Query: 181 PGDRIRGVLYSVRPEARGAQLFVSRSRPEMLVELFRIEVPEIGEEVIEIKAAARDPGSRA 240
           PGDRIRGVLYSVRPEARGAQLFV+RS+PEML+ELFRIEVPEIGEE+IEIKAAARDPGSRA
Sbjct: 175 PGDRIRGVLYSVRPEARGAQLFVTRSKPEMLIELFRIEVPEIGEELIEIKAAARDPGSRA 234

Query: 241 KIAVKTNDKRIDPVGACVGMRGARVQAVSSELGGERIDIILWDDNPAQFVINAMAPADVV 300
           KIAVKTNDKRIDPVGACVGMRGARVQAVSSELGGERIDI+LWDDNPAQFVINAMAPADV 
Sbjct: 235 KIAVKTNDKRIDPVGACVGMRGARVQAVSSELGGERIDIVLWDDNPAQFVINAMAPADVA 294

Query: 301 SIVVDEDTCTMDIAVESSNLAQAIGRNGQNVRLASQLLKQHRSDDRWELNVMTVEDLQAK 360
           SIVVDED  TMDIAVE+ NLAQAIGRNGQNVRLASQL         WELNVMTV+DLQAK
Sbjct: 295 SIVVDEDNHTMDIAVEAGNLAQAIGRNGQNVRLASQL-------SGWELNVMTVDDLQAK 347

Query: 361 HQAEAHAAIDVFTKHLDIDEEFATVLVEEGFSSLEELAYVPIKELLAIEGLDEETVEALR 420
           HQAEAHAAID+FTKHLDIDEEFATVLVEEGFSSLEELAYVPI ELL ++GLDEET+EALR
Sbjct: 348 HQAEAHAAIDMFTKHLDIDEEFATVLVEEGFSSLEELAYVPINELLEVDGLDEETIEALR 407

Query: 421 ERAKAALTTLALAHEESLGDGQPAEDLLGLPGLSRELAFKLAAIGVCTLEDLAEQGVDDL 480
           ERAK ALTTLALA EESLG+ +PAEDLL L GL R LAF+LA+ GVCTLEDLAEQGVDDL
Sbjct: 408 ERAKNALTTLALAKEESLGNQEPAEDLLNLEGLDRALAFRLASKGVCTLEDLAEQGVDDL 467

Query: 481 TDIEELNDEQAGELIMAARNICWFGDD 507
           TDIE L+DEQAG LIMAARNICWFGDD
Sbjct: 468 TDIEGLSDEQAGALIMAARNICWFGDD 494