Pairwise Alignments

Query, 509 a.a., transcription termination factor NusA from Pectobacterium carotovorum WPP14

Subject, 495 a.a., transcription termination protein NusA from Klebsiella michiganensis M5al

 Score =  827 bits (2136), Expect = 0.0
 Identities = 434/507 (85%), Positives = 466/507 (91%), Gaps = 13/507 (2%)

Query: 1   MNKEILAVVEAVSNEKALPREKIFEALETALATATKKKYEQEIDVRVSIDRKTGDFDTFR 60
           MNKEILAVVEAVSNEKALPREKIFEALE+ALATATKKKYEQEIDVRV IDRK+GDFDTFR
Sbjct: 1   MNKEILAVVEAVSNEKALPREKIFEALESALATATKKKYEQEIDVRVEIDRKSGDFDTFR 60

Query: 61  RWLVVNEVTQPTREITLEAAQFEDPALDVGGYVEDQIESVTFDRITTQTAKQVIVQKVRE 120
           RWLVV EVTQPTREITLEAA++ED +++ G YVEDQIESVTFDRITTQTAKQVIVQKVRE
Sbjct: 61  RWLVVEEVTQPTREITLEAARYEDESMNPGDYVEDQIESVTFDRITTQTAKQVIVQKVRE 120

Query: 121 AERAMVVDQFREQEGEIITGVVKKVNRDNISLEVRPIDGSNTSAEAVIGREDMLPRENFR 180
           AERAMVVDQFRE EGEIITGVVKKVNRDNI+L++    G+N  AEAVI REDMLPRENFR
Sbjct: 121 AERAMVVDQFREHEGEIITGVVKKVNRDNITLDL----GNN--AEAVILREDMLPRENFR 174

Query: 181 PGDRIRGVLYSVRPEARGAQLFVSRSRPEMLVELFRIEVPEIGEEVIEIKAAARDPGSRA 240
           PGDRIRGVLY+VRPEARGAQLFV+RS+PEMLVELFRIEVPEIGEEV+EIKAAARDPGSRA
Sbjct: 175 PGDRIRGVLYAVRPEARGAQLFVTRSKPEMLVELFRIEVPEIGEEVLEIKAAARDPGSRA 234

Query: 241 KIAVKTNDKRIDPVGACVGMRGARVQAVSSELGGERIDIILWDDNPAQFVINAMAPADVV 300
           KIAVKTNDKRIDPVGACVGMRGARVQAVS+ELGGERIDI+LWDDNPAQFVINAMAPADV 
Sbjct: 235 KIAVKTNDKRIDPVGACVGMRGARVQAVSTELGGERIDIVLWDDNPAQFVINAMAPADVA 294

Query: 301 SIVVDEDTCTMDIAVESSNLAQAIGRNGQNVRLASQLLKQHRSDDRWELNVMTVEDLQAK 360
           SIVVDED  TMDIAVE+ NLAQAIGRNGQNVRLASQL         WELNVMTV+DLQAK
Sbjct: 295 SIVVDEDKHTMDIAVEAGNLAQAIGRNGQNVRLASQL-------SGWELNVMTVDDLQAK 347

Query: 361 HQAEAHAAIDVFTKHLDIDEEFATVLVEEGFSSLEELAYVPIKELLAIEGLDEETVEALR 420
           HQAEAHAAID FTK+LDIDE+FAT+LVEEGF++LEELAYVP+KELL I+GLDE TVEALR
Sbjct: 348 HQAEAHAAIDTFTKYLDIDEDFATLLVEEGFATLEELAYVPMKELLEIDGLDEATVEALR 407

Query: 421 ERAKAALTTLALAHEESLGDGQPAEDLLGLPGLSRELAFKLAAIGVCTLEDLAEQGVDDL 480
           ERAK ALTTLALA EESLGD +PA+DLL L G+ R LAF LAA GVCTLEDLAEQG+DDL
Sbjct: 408 ERAKNALTTLALAKEESLGDSKPADDLLNLEGMDRALAFTLAARGVCTLEDLAEQGIDDL 467

Query: 481 TDIEELNDEQAGELIMAARNICWFGDD 507
            DIE L DE+AGELIMAARNICWFGD+
Sbjct: 468 ADIEGLTDEKAGELIMAARNICWFGDE 494