Pairwise Alignments

Query, 509 a.a., transcription termination factor NusA from Pectobacterium carotovorum WPP14

Subject, 500 a.a., Transcription termination/antitermination protein NusA from Enterobacter sp. TBS_079

 Score =  838 bits (2164), Expect = 0.0
 Identities = 437/507 (86%), Positives = 470/507 (92%), Gaps = 8/507 (1%)

Query: 1   MNKEILAVVEAVSNEKALPREKIFEALETALATATKKKYEQEIDVRVSIDRKTGDFDTFR 60
           MNKEILAVVEAVSNEK+LPREKIFEALE+ALATATKKKYEQEIDVRV IDRK+GDFDTFR
Sbjct: 1   MNKEILAVVEAVSNEKSLPREKIFEALESALATATKKKYEQEIDVRVEIDRKSGDFDTFR 60

Query: 61  RWLVVNEVTQPTREITLEAAQFEDPALDVGGYVEDQIESVTFDRITTQTAKQVIVQKVRE 120
           RW++V EVTQPT+EITLEAA+FED +L+VG YVEDQIESVTFDRITTQTAKQVIVQKVRE
Sbjct: 61  RWVIVEEVTQPTKEITLEAARFEDESLNVGDYVEDQIESVTFDRITTQTAKQVIVQKVRE 120

Query: 121 AERAMVVDQFREQEGEIITGVVKKVNRDNISLEVRPIDGSNTSAEAVIGREDMLPRENFR 180
           AERA+VVDQFR+QEGEIITGVVKKVNRDNISLE++  +G   +AEAVI REDMLPRENFR
Sbjct: 121 AERALVVDQFRDQEGEIITGVVKKVNRDNISLEIKS-EGLPGNAEAVILREDMLPRENFR 179

Query: 181 PGDRIRGVLYSVRPEARGAQLFVSRSRPEMLVELFRIEVPEIGEEVIEIKAAARDPGSRA 240
           PGDRIRGVLY+VRPEARGAQLFV+RS+PEML+ELFRIEVPEIGEEVIEIKAAARDPGSRA
Sbjct: 180 PGDRIRGVLYAVRPEARGAQLFVTRSKPEMLIELFRIEVPEIGEEVIEIKAAARDPGSRA 239

Query: 241 KIAVKTNDKRIDPVGACVGMRGARVQAVSSELGGERIDIILWDDNPAQFVINAMAPADVV 300
           KIAVKTNDKRIDPVGACVGMRGARVQAVS+ELGGERIDI+LWDDNPAQFVINAMAPADV 
Sbjct: 240 KIAVKTNDKRIDPVGACVGMRGARVQAVSTELGGERIDIVLWDDNPAQFVINAMAPADVA 299

Query: 301 SIVVDEDTCTMDIAVESSNLAQAIGRNGQNVRLASQLLKQHRSDDRWELNVMTVEDLQAK 360
           SIVVDED  TMDIAVE+ NLAQAIGRNGQNVRLASQL         WELNVMTV+DLQAK
Sbjct: 300 SIVVDEDKHTMDIAVEAGNLAQAIGRNGQNVRLASQL-------SGWELNVMTVDDLQAK 352

Query: 361 HQAEAHAAIDVFTKHLDIDEEFATVLVEEGFSSLEELAYVPIKELLAIEGLDEETVEALR 420
           HQAEAHAAID FTK+LDIDE+FATVLVEEGFS+LEELAYVP+KELL I+GLDE TVEALR
Sbjct: 353 HQAEAHAAIDTFTKYLDIDEDFATVLVEEGFSTLEELAYVPMKELLEIDGLDEATVEALR 412

Query: 421 ERAKAALTTLALAHEESLGDGQPAEDLLGLPGLSRELAFKLAAIGVCTLEDLAEQGVDDL 480
           ERAK ALTTLALA EESLGD +PA+DLL L GL R +AFKLAA GVCTLEDLAEQGVDDL
Sbjct: 413 ERAKNALTTLALAQEESLGDKKPADDLLNLEGLDRAIAFKLAARGVCTLEDLAEQGVDDL 472

Query: 481 TDIEELNDEQAGELIMAARNICWFGDD 507
            DIE L DE+AGELIMAARNICWFGD+
Sbjct: 473 ADIEGLTDEKAGELIMAARNICWFGDE 499