Pairwise Alignments

Query, 419 a.a., integrase arm-type DNA-binding domain-containing protein from Pectobacterium carotovorum WPP14

Subject, 391 a.a., Integrase from Pseudomonas stutzeri RCH2

 Score =  254 bits (650), Expect = 2e-72
 Identities = 137/401 (34%), Positives = 226/401 (56%), Gaps = 18/401 (4%)

Query: 2   LTDSKVRSAKPLAKSYKLTDSQGLYLTVSPSGAKLWYFRYRFCGKENRLAFGPYPQTTLA 61
           LT  +V+SA P    Y L D  GL+L +  +G K W FR+R  GK++ ++ G   + TLA
Sbjct: 3   LTALQVKSAAPRKSDYGLADGGGLFLWIRAAGGKSWRFRFRLDGKQSHISLGTIDKVTLA 62

Query: 62  EAREKRDAARKLLASGISPSQLRK--SNNPAVDESRTFQSVALAWHTSSLKLWSDTHADK 119
           +AR+    AR+L+A G  P   RK      A+  + TF+S+AL WH      WS  +A  
Sbjct: 63  QARQLASDARQLVAQGRHPGLERKVMRAQAAMSRANTFKSLALEWHQHKAPRWSVGYAGD 122

Query: 120 ILTCLKRYVFPAIGAMDIAQVETRHLAQLVKAIDDKGVHDVAGRVRQHLTKIMRHAVQQG 179
           ++   +  VFP +G++ +  ++     Q+ + I+ +G  +   +VRQ   ++ R A+  G
Sbjct: 123 VVEAFELDVFPQVGSLPLTDIKPMQWLQVFRRIESRGALEKLRKVRQRCQEVYRFAIATG 182

Query: 180 VIKYNPAYDLDGVVTPVATQHHPALPLKLLPELLEKMENYKGRMLTRLALELNLHVFLRS 239
             +YNP  D+ G +    ++H+P LP+  +P L+  ++   G  + ++A  L +   +R+
Sbjct: 183 RAEYNPIADIGGALQTPTSRHYPFLPIAEIPALIRSIQACPGHDVVKIATRLLILTGVRT 242

Query: 240 SELRFARWDEFNLKAHIWSVPAQREAVNGVRFSERGAKMKDEHLVPLSRQAVALLKQIQA 299
           +ELR   W EF+L   +W +PA R             KM+  HLVPLS+QAVA+L++++ 
Sbjct: 243 AELRGVPWSEFDLDKALWLIPAAR------------MKMRRAHLVPLSQQAVAVLRELER 290

Query: 300 ISGESVFVFPGAHTLNKPMSENTINKALRVIGYDTKTEVCGHGFRTMACSALNESGRWSK 359
           I+G     FPG +   KPMSE  IN+ L+  GYD +    GHGFR    + L+E G +  
Sbjct: 291 ITGGYTLAFPGRNDPAKPMSEAAINQLLKRSGYDGR--ATGHGFRHTMSTTLHEQG-YPS 347

Query: 360 DAIERQMSHKERNGVRAAYVHKAEHLEARIEMMQWWSDYLD 400
           + +E Q++H ++N +R  Y H A++LE R EM+QW+++++D
Sbjct: 348 EWVETQLAHVDKNSIRGTYNH-AQYLEGRREMLQWYANHVD 387