Pairwise Alignments

Query, 311 a.a., ABC transporter permease from Pectobacterium carotovorum WPP14

Subject, 302 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  178 bits (451), Expect = 2e-49
 Identities = 101/275 (36%), Positives = 154/275 (56%), Gaps = 8/275 (2%)

Query: 38  RAFIRNPAGMAGLLLLITVFLMAALAPLLYPGDPLDMVAQPFLWPGENPDFP----LGTD 93
           R F  N A M  L++LI +  +A + PLL P    ++  +    P   PDF      GTD
Sbjct: 31  RRFYGNRAAMTSLVILIAILALAVVGPLLSPHPYDEIYWEAIQMP---PDFANGFWFGTD 87

Query: 94  SMGRDVAAGIVHGSQVSLQIGFSAVIVSLLIGTVVGALAGYFGGRVDDLLVHITELFQTF 153
             GRD+    ++G++VSL +G  A  VSL+IG V GA+AGYFGGRVD L++   ++  + 
Sbjct: 88  GNGRDLFVRTLYGARVSLAVGVIATTVSLVIGVVYGAIAGYFGGRVDMLMMRFVDVLYSL 147

Query: 154 PTFLLVVVLVAIGSPSVTLISLAIGIASWPTIARLVRAEFRSLRESDFVLAARSQGFSSL 213
           P    V++L+ +   ++ LI +A+G   W T+AR+VR +  ++   +F+ AA + G S  
Sbjct: 148 PFMFFVIMLMVVFGRNIFLIFVALGAVEWLTMARIVRGQTMAVTRKEFIEAAHAIGVSDA 207

Query: 214 RIIFQEMLPNALPSIIVTTSVMVASAILIESALSFLGFG-DPNRVSWGSMIGAGRESLRT 272
            II + ++PN L  +IV  ++ +   +L ES LSFLG G      SWG +I  G   L  
Sbjct: 208 TIIRRHVIPNILGPVIVYATLTIPQVVLTESFLSFLGLGVQEPLTSWGVLISEGARVLEV 267

Query: 273 AWFLTALPGTALVLTVLSLNLVGDALNDALNPRLR 307
           + ++   P   L LT+L  N +GD L DAL+P+ R
Sbjct: 268 SPWMLLFPAFFLALTLLCFNFIGDGLRDALDPKDR 302