Pairwise Alignments

Query, 260 a.a., flap endonuclease Xni from Pectobacterium carotovorum WPP14

Subject, 934 a.a., DNA polymerase I from Vibrio cholerae E7946 ATCC 55056

 Score =  115 bits (288), Expect = 3e-30
 Identities = 78/259 (30%), Positives = 129/259 (49%), Gaps = 18/259 (6%)

Query: 5   LLIVDALN-LIRRIHAVQGSP--------CITACQHALHQLIQNSQPTHAVAVFDDEDRD 55
           L+++D  + L R  HA  G+          I    + +  +++         +FD + + 
Sbjct: 9   LILIDGSSYLYRAFHAYPGTMSNGEIPTNAIYGVVNMIRSMMRQFASDRMAVIFDAKGK- 67

Query: 56  TSWRHQLLPDYKAGRTPMPENLKQELPQIKAAFAAVGVASWHSPGNEADDLAATLAVKLS 115
            ++R ++   YKA R PMP+ L+ ++  +     A+G+      G EADD+  TLA + S
Sbjct: 68  -TFRDEMYDQYKAHRPPMPDELRCQVEPLHQVIRAMGLPLLAIEGVEADDVIGTLARQAS 126

Query: 116 SAGHQATIVSTDKGYCQLLAPHIQIRDYFQKRWLDLPFIEQEFGVSPQQLTDYWGLAGIS 175
            AG    I + DK   QL+  +I + +      LD   + ++FG+ P+ + DY  L G  
Sbjct: 127 QAGMPVLISTGDKDMAQLVDDNITLINTMTNVVLDREGVIEKFGIPPELIIDYLALMGDK 186

Query: 176 SSKIPGVAGIGPKSAAQLLQQAGSLEALYQQLDTV-------PEKWRKKLEQHKEMALIS 228
              IPGV G+G K+A  LLQ  G LEALY  LD +        +   +KLE+++  A +S
Sbjct: 187 VDNIPGVPGVGEKTATALLQGIGGLEALYANLDKIAALGFRGSKTMAQKLEENRGNAKLS 246

Query: 229 RQIATLRTDLTLNGNLQQL 247
            Q+AT++ D+ L  + Q L
Sbjct: 247 YQLATIKCDVELEESPQTL 265