Pairwise Alignments

Query, 260 a.a., flap endonuclease Xni from Pectobacterium carotovorum WPP14

Subject, 923 a.a., DNA-directed DNA polymerase (RefSeq) from Shewanella amazonensis SB2B

 Score =  115 bits (289), Expect = 3e-30
 Identities = 68/228 (29%), Positives = 116/228 (50%), Gaps = 9/228 (3%)

Query: 33  LHQLIQNSQPTHAVAVFDDEDRDTSWRHQLLPDYKAGRTPMPENLKQELPQIKAAFAAVG 92
           L  L+   +PT    VFD   +  ++R+++  +YKA R PMP++L+ ++  +     A+G
Sbjct: 46  LRSLLSRYRPTQMAVVFDA--KGPTFRNEMYQEYKAHRPPMPDDLRSQIAPLHRIIKALG 103

Query: 93  VASWHSPGNEADDLAATLAVKLSSAGHQATIVSTDKGYCQLLAPHIQIRDYFQKRWLDLP 152
           +     PG EADD+  T+A++  + G    I + DK   QL+  HI + +      L   
Sbjct: 104 IPLISIPGVEADDVIGTIAIQAGNEGRSVLISTGDKDMAQLVNEHITLINTMTDTILGPE 163

Query: 153 FIEQEFGVSPQQLTDYWGLAGISSSKIPGVAGIGPKSAAQLLQQAGSLEALYQQLDTVPE 212
            +  +FGV P+ + D   + G  +  IPG+ G+G K+A  +L  AG +  L  + D V +
Sbjct: 164 EVATKFGVGPELIIDLLAMMGDKADNIPGLPGVGEKTALAMLTGAGGVAKLLAEPDCVTD 223

Query: 213 -------KWRKKLEQHKEMALISRQIATLRTDLTLNGNLQQLRLPVQN 253
                      K+  + EM  +S ++AT++TD+TL  +  QL L   N
Sbjct: 224 LGFRGAKTMAAKIRDNAEMLELSYKLATIKTDVTLEQDWHQLSLSEPN 271