Pairwise Alignments

Query, 378 a.a., bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD from Pectobacterium carotovorum WPP14

Subject, 419 a.a., riboflavin biosynthesis protein RibD (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  198 bits (503), Expect = 3e-55
 Identities = 145/414 (35%), Positives = 200/414 (48%), Gaps = 53/414 (12%)

Query: 14  ELYMARALELARRGCFTTAPNPNVGCVIVRDGEIVGEGYHFRAGEPHAEVHALRMA---G 70
           E++M  A+ LARRG +  APNP VG V+VRDG++V  GYH   G PHAEV  LR A   G
Sbjct: 8   EIFMREAIALARRGRWRAAPNPTVGAVLVRDGQVVARGYHTACGMPHAEVECLRDAAANG 67

Query: 71  ERARGATAYVTLEPCSHHGRTPPCADALITAGVSRVVAAMQDPNPQVAGRGLHRLQQAGI 130
                 T  VTLEPC+HHG+TPPC+ A++ AG+  VV  M DPNP VA  G   L+Q G+
Sbjct: 68  VDPAACTLMVTLEPCNHHGKTPPCSQAVLAAGIRHVVVGMADPNP-VARGGAEFLRQHGV 126

Query: 131 AVSHGLMMAEAEKVNVGFLKRMRTGFPYVQLKMAASLDGRTAMASGESQWITSPQARQDV 190
            V  G+   +   +   F+   +T  PYV LK+A++LDGR A  +G SQWI+   +R+ V
Sbjct: 127 RVDMGVCEQDCRDLVADFVTWKKTDLPYVILKLASTLDGRIATRAGHSQWISCAASRRRV 186

Query: 191 QRFRA----ESAAILSTSATVLADDPSLTVRWSEL---------GADVQKRYSESDLRQP 237
              RA       A+L    T+ AD+P LT R  +          G       +++  RQP
Sbjct: 187 HAIRAGAGHAGGAVLVGGGTLFADNPLLTARCGDFSDAFPAAPQGGCAGIDEADAPRRQP 246

Query: 238 VRVVVDS---------------QQRV------TPQHRIVNQPGETWLAR------VQADE 270
           + V V S               QQR       T +    +   +T  A       + A  
Sbjct: 247 LAVAVTSRMDEVAARAGDLALLQQRAADTIFWTTETAAASPAADTVRAMGVRVWGLPAAS 306

Query: 271 QAWPQGVEQVMLPQHNGGVDLVALMMVLGRRQINS------VWVEAGASLAGALLNAGVV 324
            A   G  +   P   G    V L +  G  ++ +      V  E G  L  ALL AG+V
Sbjct: 307 AAHEHG--ETGKPGETGATSAVGLDLRAGLARLRAEAGCLYVLCEGGGQLGLALLEAGLV 364

Query: 325 DELIVYLAPKLLGEN-ARSLCLLPGLDQLSQAPEFDIADVRQIGPDLRLRLKPK 377
            E  ++LAPK+LG+N AR L       ++  A    +AD    G D+ + L+ K
Sbjct: 365 HEFELHLAPKVLGDNAARPLFDGRAPLRMDDALGLRVADTAPSGDDIIVTLRQK 418