Pairwise Alignments

Query, 139 a.a., transcription antitermination factor NusB from Pectobacterium carotovorum WPP14

Subject, 156 a.a., N utilization substance protein B from Vibrio cholerae E7946 ATCC 55056

 Score =  166 bits (420), Expect = 1e-46
 Identities = 83/150 (55%), Positives = 113/150 (75%), Gaps = 14/150 (9%)

Query: 1   MKPAARRRARECAVQALYSWQLSKNDIADVEHQFLS-----EQDVK---------DVDIT 46
           +KPAARR AR+ A+QA+YSWQ++K ++A +E QFL+     E++ +         + D++
Sbjct: 5   VKPAARRNARQFALQAIYSWQITKENVATIEEQFLTSGKYDEEEHRAAEPALAAPETDVS 64

Query: 47  YFRELLAGVATQAEKLDQLMAPFLSRQIEELGQVEKAILRLAMFELSKREDVPYKVAINE 106
           YFR+LLAGV     +LD  + PF+SR +++L  +E A+LRLAM+E+++REDVPYKV INE
Sbjct: 65  YFRDLLAGVVLNHNELDSKLRPFVSRPMQDLDMMELALLRLAMYEMTRREDVPYKVVINE 124

Query: 107 AIELAKIFGAEDSHKFVNGVLDKVAPSVRK 136
           AIELAK+F AEDSHKFVNGVLDK AP VRK
Sbjct: 125 AIELAKVFAAEDSHKFVNGVLDKAAPHVRK 154