Pairwise Alignments

Query, 139 a.a., transcription antitermination factor NusB from Pectobacterium carotovorum WPP14

Subject, 134 a.a., transcription antitermination protein NusB (RefSeq) from Shewanella sp. ANA-3

 Score =  178 bits (452), Expect = 2e-50
 Identities = 87/130 (66%), Positives = 109/130 (83%)

Query: 1   MKPAARRRARECAVQALYSWQLSKNDIADVEHQFLSEQDVKDVDITYFRELLAGVATQAE 60
           MKP+ RR+AR  AVQA+YSWQLS N+IADVEH+FL+EQ +  VD+ YFREL AGVAT+  
Sbjct: 1   MKPSERRKARRLAVQAIYSWQLSGNNIADVEHEFLTEQSLDGVDVAYFRELFAGVATKKT 60

Query: 61  KLDQLMAPFLSRQIEELGQVEKAILRLAMFELSKREDVPYKVAINEAIELAKIFGAEDSH 120
           +LD+L  P L R I+E+  VEKAI+RLA +EL+ R+DVP+KVAINEAIELAK FGA++SH
Sbjct: 61  QLDELFIPHLDRPIDEVSPVEKAIVRLAAYELTFRKDVPFKVAINEAIELAKAFGADESH 120

Query: 121 KFVNGVLDKV 130
           KFVNG+LDK+
Sbjct: 121 KFVNGLLDKL 130