Pairwise Alignments

Query, 879 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit A from Pectobacterium carotovorum WPP14

Subject, 936 a.a., DNA gyrase, A subunit from Pseudomonas stutzeri RCH2

 Score = 1158 bits (2996), Expect = 0.0
 Identities = 580/908 (63%), Positives = 723/908 (79%), Gaps = 47/908 (5%)

Query: 1   MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN 60
           M +LA+EI PVNIE+ELK SYLDYAMSVI+GRALPD RDGLKPVHRRVL+AMS LGNDWN
Sbjct: 1   MGELAKEILPVNIEDELKQSYLDYAMSVIIGRALPDARDGLKPVHRRVLFAMSELGNDWN 60

Query: 61  KPYKKSARVVGDVIGKYHPHGDSAVYETIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
           KPYKKSARVVGDVIGKYHPHGDSAVY+TIVRMAQPFSLRYMLVDGQGNFGS+DGDSAAAM
Sbjct: 61  KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120

Query: 121 RYTEIRMSKIAHELLADLEKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMAT 180
           RYTE+RM+K+AHELLADLEKETVD+VPNYDGTEQIP VMPT++PNLLVNGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKLAHELLADLEKETVDWVPNYDGTEQIPAVMPTKVPNLLVNGSSGIAVGMAT 180

Query: 181 NIPPHNLTEVVNGCLAYIDDENISLEGLMEHIKGPDFPTAAIINGRRGIEEAYRTGRGKI 240
           NIPPHNL EV++GCLA ID+ +I+++ LM+ I GPDFPTA IINGR GI EAYRTGRG+I
Sbjct: 181 NIPPHNLGEVIDGCLALIDNADITIDELMQFIPGPDFPTAGIINGRAGIIEAYRTGRGRI 240

Query: 241 YIRARAEVE-ADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRIEGISALRDESDKD 299
           YIRARA++E  D   GR+ I++ E+PYQ+NKARLIEKIAELVK+K+IEGI+ LRDESDKD
Sbjct: 241 YIRARADIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD 300

Query: 300 GMRIVIEIKRDAVGEVVLNNLYSQTQLQTSFGINMVALHQGQPKIMPLKDILVAFVRHRR 359
           GMR+VIE++R  V EV+LNNLY+QTQLQ+ FGIN+VAL  GQP+ + LK++L AFVRHRR
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINVVALIDGQPRTLNLKELLEAFVRHRR 360

Query: 360 EVVTRRTIFELRKARDRAHILEGLAIALANIDPIIELIRRAASPAEAKASLIAQAWELGS 419
           EVVTRRT++ELRKAR+R HILEG A+AL+NIDP+I +I+ + +PAEAK +LI+ AWE  +
Sbjct: 361 EVVTRRTVYELRKARERGHILEGQAVALSNIDPVIAVIKASPTPAEAKDALISTAWESSA 420

Query: 420 VATMLERAGDDAARPEWLEPEFGIRDGRYYLTEQQAQAILDLRLQKLTGMEHEKLLDEYK 479
           V  M+ERAG DA RPE L+P+FG+RDG+Y+L+ +QAQAILDLRL +LTG+EHEKLL EY+
Sbjct: 421 VEAMVERAGADACRPEGLDPQFGLRDGKYFLSPEQAQAILDLRLHRLTGLEHEKLLSEYQ 480

Query: 480 ELLAEIAELLYILNSPERLMEVIREELEAIKTQYSDERRTEITANTADINIEDLINQEDV 539
           E+L +I EL+ IL +P RLMEVIREELE +K  + D RRTEI  +  D+ + DLI +E+ 
Sbjct: 481 EILTQIGELIRILTNPVRLMEVIREELEGVKRDFGDARRTEILESRLDLTLADLITEEER 540

Query: 540 VVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRL 599
           VVT+SH GY K QPL+ Y+AQRRGG+GK+A  +KEED+++ LLVAN+H T+L FSS+G++
Sbjct: 541 VVTISHGGYAKSQPLAAYQAQRRGGRGKAATGVKEEDYVEHLLVANSHTTLLLFSSKGKV 600

Query: 600 YWMKVYQLPEASRGARGRPIVNLLPLEADERITAILPV---------------------- 637
           YW+K Y++PEASR +RGRP+VNLLPL+  ERITA+L V                      
Sbjct: 601 YWLKTYEIPEASRTSRGRPLVNLLPLDEGERITAMLQVDLEALRKQAAEGEDDLDDAEGL 660

Query: 638 -------------------REYEEGRHIFMATASGTVKKTALTEFSRPRSAGIIAVNLNE 678
                              ++   G +IFMATA+GTVKKT L +FSRPR++G+IA+ L E
Sbjct: 661 VIEHDDADEVESDDADSDEKDEPTGSYIFMATANGTVKKTPLVQFSRPRTSGLIALKLEE 720

Query: 679 GDELIGVDLTDGSDEAMLFSAEGKVVRFSEQAVRSMGRTATGVRGINLQGEDRVVSLIIP 738
           GD LI   +TDG+ E M+FS  GKV+RF E  VR MGR A GVRG+ L    R++S++IP
Sbjct: 721 GDTLIAAAVTDGAQEVMMFSDGGKVIRFKESKVRIMGRNARGVRGMRLPEGQRIISMLIP 780

Query: 739 RGEGDILTVTQNGFGKRTAVSEYPTKSRATKGVISIKVSERNGKVVGAVQVDAADQIMMI 798
                ILT +  G+GKRTA+ E+P + R  +GVI++  +ERNG +VGAVQV   ++IM+I
Sbjct: 781 ETGAQILTASVRGYGKRTAMEEFPRRGRGGQGVIAMVTNERNGPLVGAVQVLEGEEIMLI 840

Query: 799 TDAGTLVRTRVSEVSIVGRNTQGVTLIRTAEDEHVVGLQRVAEPVEDEELDGVVKVEGEV 858
           +D GTLVRTRV EVS +GRNTQGVTLI+ ++ EH+VGL+RV EP E++ L+ +     E 
Sbjct: 841 SDQGTLVRTRVDEVSSLGRNTQGVTLIKLSKGEHLVGLERVQEPSEEDVLEDI-----EA 895

Query: 859 AEDDDAID 866
             DDDA++
Sbjct: 896 LLDDDALE 903