Pairwise Alignments

Query, 879 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit A from Pectobacterium carotovorum WPP14

Subject, 894 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit A from Vibrio cholerae E7946 ATCC 55056

 Score = 1305 bits (3376), Expect = 0.0
 Identities = 669/892 (75%), Positives = 773/892 (86%), Gaps = 31/892 (3%)

Query: 1   MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN 60
           MSDLA+EITPVNIE+EL+SSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+VLGNDWN
Sbjct: 1   MSDLAKEITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60

Query: 61  KPYKKSARVVGDVIGKYHPHGDSAVYETIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
           K YKKSARVVGDVIGKYHPHGDSAVY+TIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
Sbjct: 61  KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120

Query: 121 RYTEIRMSKIAHELLADLEKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMAT 180
           RYTE+RMSKIAHELLADL+KETVD+VPNYDGTEQIP V+PT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGASGIAVGMAT 180

Query: 181 NIPPHNLTEVVNGCLAYIDDENISLEGLMEHIKGPDFPTAAIINGRRGIEEAYRTGRGKI 240
           NIPPHNL EV++GCLAYID+E I+++ LM++I GPDFPTAA+I+GR+GI +AY+TGRGK+
Sbjct: 181 NIPPHNLGEVIDGCLAYIDNEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKV 240

Query: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRIEGISALRDESDKDG 300
           Y+R++AE+E D K G+ETIIV EIPYQVNKARLIEKIAELVK+K++EGISALRDESDKDG
Sbjct: 241 YMRSKAEIETD-KNGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDG 299

Query: 301 MRIVIEIKRDAVGEVVLNNLYSQTQLQTSFGINMVALHQGQPKIMPLKDILVAFVRHRRE 360
           MRIVIE KRDAVGEVVLNNLY+ TQLQT+FGINMVAL  GQPK+  LK++L  FV HRRE
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRRE 359

Query: 361 VVTRRTIFELRKARDRAHILEGLAIALANIDPIIELIRRAASPAEAKASLIAQAWELGSV 420
           VVTRRTIFELRKAR+RAHILEGLA+ALANID IIELIRRAA+PAEAK  LIA+ W+LG+V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLALALANIDEIIELIRRAATPAEAKEGLIARGWDLGNV 419

Query: 421 ATMLERAGDDAARPEWLEPEFGIRDGRYYLTEQQAQAILDLRLQKLTGMEHEKLLDEYKE 480
           A MLERAG DAARPEWLEP++GIRDG+Y+LTEQQAQAILDLRL KLTG+EHEK+LDEYK+
Sbjct: 420 AAMLERAGTDAARPEWLEPQYGIRDGKYFLTEQQAQAILDLRLHKLTGLEHEKILDEYKQ 479

Query: 481 LLAEIAELLYILNSPERLMEVIREELEAIKTQYSDERRTEITANTADINIEDLINQEDVV 540
           LL EIA L++IL S ERLMEVIREELEAI+  +SD RRTEITA T DI++E+LI +EDVV
Sbjct: 480 LLEEIAALMHILASTERLMEVIREELEAIRAGFSDARRTEITAATHDIDMEELIAREDVV 539

Query: 541 VTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY 600
           VTLSH+GYVKYQ LSDYEAQRRGGKGKSA ++KEED+I+RLLVANTHD IL FS+RG+ Y
Sbjct: 540 VTLSHEGYVKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILLFSTRGKTY 599

Query: 601 WMKVYQLPEASRGARGRPIVNLLPLEADERITAILPVREYEEGRHIFMATASGTVKKTAL 660
            MKVYQLP ASR ARG+PIVNLLPLE +ERITAILPV E+ E + IFMAT  GTVKKT+L
Sbjct: 600 RMKVYQLPLASRTARGKPIVNLLPLEENERITAILPVTEFSEDKFIFMATGDGTVKKTSL 659

Query: 661 TEFSRPRSAGIIAVNLNEGDELIGVDLTDGSDEAMLFSAEGKVVRFSE------------ 708
            +F+  R+ G+IA+NL + D LIGVD+TDG  E MLFS  GKVVRF E            
Sbjct: 660 DQFANVRANGLIALNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKESEETAVVDENGQ 719

Query: 709 -------------QAVRSMGRTATGVRGINLQGEDRVVSLIIPRGEGDILTVTQNGFGKR 755
                        + VR MGRTA GVRG+ L   D+VVSLI+P+ EGD+LTVT+NG+GKR
Sbjct: 720 PVLDENGQPEIKFKGVRPMGRTAAGVRGMKLADGDQVVSLIVPKTEGDVLTVTENGYGKR 779

Query: 756 TAVSEYPTKSRATKGVISIKVSERNGKVVGAVQVDAADQIMMITDAGTLVRTRVSEVSIV 815
           T++SEYPTK R T+GV+SIKVSERNG VVGAVQV   D+ MMIT+AGTLVRTRV+EVS V
Sbjct: 780 TSLSEYPTKGRGTQGVVSIKVSERNGSVVGAVQVAEGDEFMMITNAGTLVRTRVAEVSQV 839

Query: 816 GRNTQGVTLIRTAEDEHVVGLQRVAEPVEDEEL----DGVVKVEGEVAEDDD 863
           GRNTQGVTLIRT+E E VVGLQR+ E +E+ EL    + +V+ +  VA+DDD
Sbjct: 840 GRNTQGVTLIRTSEGESVVGLQRIDE-IEESELPEGEEALVENDAPVAQDDD 890