Pairwise Alignments

Query, 879 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit A from Pectobacterium carotovorum WPP14

Subject, 931 a.a., DNA gyrase subunit A from Sinorhizobium meliloti 1021

 Score =  813 bits (2100), Expect = 0.0
 Identities = 452/926 (48%), Positives = 601/926 (64%), Gaps = 70/926 (7%)

Query: 8   ITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWNKPYKKSA 67
           I P++I EE++ SYLDYAMSVIV RALPDVRDGLKPVHRR+LY MS LG DWNK Y K A
Sbjct: 16  IEPISIIEEMQRSYLDYAMSVIVSRALPDVRDGLKPVHRRILYGMSELGIDWNKKYVKCA 75

Query: 68  RVVGDVIGKYHPHGDSAVYETIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIRM 127
           RV GDV+GKYHPHG++A+Y+ + RMAQ +SLR  L+DGQGNFGS+DGD  AA RYTE R+
Sbjct: 76  RVTGDVMGKYHPHGNAAIYDALARMAQDWSLRLPLIDGQGNFGSVDGDPPAAERYTECRL 135

Query: 128 SKIAHELLADLEKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMATNIPPHNL 187
            K AH LL DL+K+TVDF  NYDGT   P V+P + PNLLVNG+ GIAVGMATNIPPHNL
Sbjct: 136 QKAAHSLLDDLDKDTVDFRDNYDGTLHEPVVVPAKFPNLLVNGAGGIAVGMATNIPPHNL 195

Query: 188 TEVVNGCLAYIDDENISLEGLMEHIKGPDFPTAAIINGRRGIEEAYRTGRGKIYIRARAE 247
            EV++GC+A ID+  I L  LM+ I GPDFPT A+I GR GI +AY TGRG + +R RA 
Sbjct: 196 VEVIDGCIALIDNPAIELPELMQIIPGPDFPTGALILGRSGIRQAYETGRGSVIMRGRAH 255

Query: 248 VEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRIEGISALRDESDKDGMRIVIEI 307
           +E   +  RE II+ EIPYQVNKA +IEK+AELV++KRIEGIS LRDESD+ G R+VIE+
Sbjct: 256 IE-PMRGDREQIIITEIPYQVNKATMIEKMAELVREKRIEGISDLRDESDRQGYRVVIEL 314

Query: 308 KRDAVGEVVLNNLYSQTQLQTSFGINMVALHQGQPKIMPLKDILVAFVRHRREVVTRRTI 367
           KRDA  EV+LN LY  T LQTSFG NMVAL+ G+P+ M L D+L AFV  R +VV+RRT 
Sbjct: 315 KRDANAEVILNQLYRYTPLQTSFGCNMVALNGGKPEQMTLLDMLRAFVSFREDVVSRRTK 374

Query: 368 FELRKARDRAHILEGLAIALANIDPIIELIRRAASPAEAKASLIAQAWELGSVATMLERA 427
           + LRKAR+RAH+L GLAIA+ANID +I+LIR+A  P  A+  L+ + W    V  ++   
Sbjct: 375 YLLRKARERAHVLVGLAIAVANIDEVIKLIRQAPDPQTAREQLMERRWPAHDVDALIRLI 434

Query: 428 GDDAARPEWLEPEFGIRDGRYYLTEQQAQAILDLRLQKLTGMEHEKLLDEYKELLAEIAE 487
            D   R           D  Y L+E+QA+AILDLRLQ+LT +  +++ DE  ++  EI +
Sbjct: 435 DDPRHRIN--------DDATYNLSEEQARAILDLRLQRLTALGRDEIGDELNKIGEEIKD 486

Query: 488 LLYILNSPERLMEVIREELEAIKTQYSDERRTEITANTADINIEDLINQEDVVVTLSHQG 547
            L IL+S  R+M++++ EL A++ ++   RRTEI     D++ EDLI QED+VVT+SH G
Sbjct: 487 YLDILSSRLRIMQIVKNELTAVRDEFGTPRRTEIAEGGPDMDDEDLIAQEDMVVTVSHLG 546

Query: 548 YVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLYWMKVYQL 607
           Y+K  PL+ Y AQRRGGKG+S    ++EDF+ RL VANTH  +L FSSRG +Y  KV++L
Sbjct: 547 YIKRVPLTTYRAQRRGGKGRSGMATRDEDFVTRLFVANTHTPVLFFSSRGIVYKEKVWRL 606

Query: 608 PEASRGARGRPIVNLLPLEADERITAILPVREYE---EGRHIFMATASGTVKKTALTEFS 664
           P  +  +RG+ ++N+LPLE  ERIT I+P+ E E   E   +  +T  GTV++  L++F 
Sbjct: 607 PIGTPQSRGKALINMLPLEPGERITTIMPLPEDETTWENLDVMFSTTRGTVRRNKLSDFV 666

Query: 665 RPRSAGIIAVNL-NEGDELIGVDLTDGSDEAMLFSAEGKVVRFSEQAVRSM-GRTATGVR 722
           +    G IA+ L  EGDE++ VD     D+ +L +A G+ +RF    VR   GR + GVR
Sbjct: 667 QVNRNGKIAMKLEEEGDEILSVDTCTEFDDVVLTTALGQCIRFPVADVRVFAGRNSIGVR 726

Query: 723 GINLQGEDRVVSLII-----------------PRGEGDILT------------VTQNG-- 751
           GI+L   DR++S+ I                    E   LT            VT  G  
Sbjct: 727 GISLGDGDRIISMAIVAHVEAEPWERAAYLKRSAAERRALTGEEEEIVLVGEEVTNGGEL 786

Query: 752 ----------------------FGKRTAVSEYPTKSRATKGVISIKVSE--RNGKVVGAV 787
                                 FGKR++  ++ T  R  KG+ +   S+    G++V A 
Sbjct: 787 TNERYEELKAREQFILTVSMKGFGKRSSSYDFRTSGRGGKGIRATDTSKTAEIGELVAAF 846

Query: 788 QVDAADQIMMITDAGTLVRTRVSEVSIVGRNTQGVTLIRTAEDEHVVGLQRVAEPVEDEE 847
            ++  DQIM+++D G L+R  V  + +  R T+GVT+  TA+DE VV ++R+ EP  DEE
Sbjct: 847 PIEHNDQIMLVSDGGQLIRVPVEGIRLASRATKGVTIFSTAKDEKVVSVERITEPDGDEE 906

Query: 848 LDGVVKVEGEVAEDDDAIDDIDGDDD 873
           ++  V  EG +AE +   D     D+
Sbjct: 907 IE-AVGAEGVMAEPESPPDTTSTPDE 931