Pairwise Alignments

Query, 879 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit A from Pectobacterium carotovorum WPP14

Subject, 943 a.a., DNA gyrase, subunit A (NCBI) from Rhodospirillum rubrum S1H

 Score =  840 bits (2171), Expect = 0.0
 Identities = 458/927 (49%), Positives = 612/927 (66%), Gaps = 80/927 (8%)

Query: 7   EITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWNKPYKKS 66
           +I+PV+IE+E+K SYLDYAMSVIV RALPDVRDGLKPVHRR+LY+M   G ++NKPY+KS
Sbjct: 12  DISPVSIEDEMKRSYLDYAMSVIVSRALPDVRDGLKPVHRRILYSMKESGYEFNKPYRKS 71

Query: 67  ARVVGDVIGKYHPHGDSAVYETIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIR 126
           AR+VGDV+GKYHPHGD ++Y+ +VRM Q F++R  L+DGQGNFGS+DGD AAAMRYTE R
Sbjct: 72  ARIVGDVMGKYHPHGDQSIYDAMVRMVQNFAMRLPLIDGQGNFGSMDGDRAAAMRYTEAR 131

Query: 127 MSKIAHELLADLEKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMATNIPPHN 186
           M+K AH LL D++KETVDF PNYD T + P V+P R PNLLVNG+ GIAVGMATNIPPHN
Sbjct: 132 MAKAAHSLLDDIDKETVDFQPNYDETTREPIVLPARFPNLLVNGAGGIAVGMATNIPPHN 191

Query: 187 LTEVVNGCLAYIDDENISLEGLMEHIKGPDFPTAAIINGRRGIEEAYRTGRGKIYIRARA 246
           L EV++ C A ID+  ++ E L+E + GPDFPT   I GR G+  A+ TGRG + +R R 
Sbjct: 192 LGEVIDACCAMIDNPAVTAEELLELVPGPDFPTGGTILGRSGVRAAHLTGRGSVIMRGRT 251

Query: 247 EVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRIEGISALRDESDKDGMRIVIE 306
             E D   GR+ IIV E+PYQVNKA ++EKIAELV++K++EGIS +RDESD+ G+R+VIE
Sbjct: 252 HFE-DISGGRQAIIVTEVPYQVNKASMVEKIAELVREKKLEGISDIRDESDRRGVRVVIE 310

Query: 307 IKRDAVGEVVLNNLYSQTQLQTSFGINMVALHQGQPKIMPLKDILVAFVRHRREVVTRRT 366
           +KRDA+ EVVLN L+  T LQTSFG+NM+AL+ G+P+++ L+ I+ AF+  R EV+ RRT
Sbjct: 311 VKRDAMAEVVLNQLFRYTPLQTSFGVNMLALNGGKPELLALRPIIEAFITFREEVIRRRT 370

Query: 367 IFELRKARDRAHILEGLAIALANIDPIIELIRRAASPAEAKASLIAQAWELGSVATMLER 426
           IFEL KAR+RAH L GLAIA+AN+DP+I+LIR A  P  A+  L+A+ W    V  +++ 
Sbjct: 371 IFELGKARERAHTLVGLAIAVANLDPVIKLIREAPDPQAAREGLMARDWPAMDVEPLIKL 430

Query: 427 AGDDAARPEWLEPEFGIRDGRYYLTEQQAQAILDLRLQKLTGMEHEKLLDEYKELLAEIA 486
                      EP   + DG Y L+E QA+AILDLRL +LTG+E +KL  E  E+  +I 
Sbjct: 431 ID---------EPGRMVIDGVYRLSEIQARAILDLRLHRLTGLERDKLHGELIEIGQQIE 481

Query: 487 ELLYILNSPERLMEVIREELEAIKTQYSDERRTEITANTADINIEDLINQEDVVVTLSHQ 546
           E L+IL S  RL E++R EL  +K  Y+  RRT +  N  + +IEDLI +E++VVT+++ 
Sbjct: 482 EYLHILRSRARLFEIMRAELVEMKEAYATPRRTTLEENEFEHDIEDLIQREEMVVTVTNT 541

Query: 547 GYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLYWMKVYQ 606
           GY+K  PL+ Y AQRRGG+G++   +++EDF+  + V NTH  +L FSS G +Y MKVY+
Sbjct: 542 GYIKRVPLTTYRAQRRGGRGRAGMSMRDEDFVTTIFVVNTHAPLLFFSSDGMVYKMKVYR 601

Query: 607 LPEASRGARGRPIVNLLPLEADERITAILPVREYE---EGRHIFMATASGTVKKTALTEF 663
           LP  +  ARG+ +VN++PL   ERIT ++P+ E E   +   +  AT +G V++  L++F
Sbjct: 602 LPLGTPQARGKAMVNIMPLNEGERITTVMPLPEDEGAWDQLDVMFATETGNVRRNRLSDF 661

Query: 664 SRPRSAGIIAVNLNEGDELIGVDLTDGSDEAMLFSAEGKVVRFSEQAVRSM-GRTATGVR 722
           +   S G IA+ L+EGD LIGV       + +L +  GK +RF+   VR   GRT+TGVR
Sbjct: 662 TNVMSNGKIAMKLDEGDHLIGVATCTDEQDVLLTTNLGKAIRFAVGDVRVFAGRTSTGVR 721

Query: 723 GINLQGEDRVVSLII---------------------------PRGEGD------------ 743
           GI L  +DRV  L I                             GE D            
Sbjct: 722 GIRLAEDDRVNRLSILGHVEASAETRAAYLKQASALRRASGETEGEDDSTLDAEPGVLSA 781

Query: 744 ------------ILTVTQNGFGKRTAVSEYPTKSRATKGVISIKVSERNGKVVGAVQVDA 791
                       +LTVT  GFGKRT+  EY    R  +G+ +I++SERNG VV A  +  
Sbjct: 782 EEFEDLRQREEFLLTVTSRGFGKRTSAYEYRVTGRGGQGIANIEMSERNGTVVAAFPIAN 841

Query: 792 ADQIMMITDAGTLVRTRVSEVSIVGRNTQGVTLIRTAED-EHVVGLQRVAEPVEDEELDG 850
            DQ+MMITD G L+R  V++V I GR TQGVTL R ++D EHVV + R+       E++G
Sbjct: 842 EDQVMMITDGGQLIRMPVNDVRIAGRKTQGVTLFRLSDDGEHVVSVARL------PEMNG 895

Query: 851 VVKVEGEVAEDDDAIDDIDGDDDIAED 877
                     DD   DD   D+ +AED
Sbjct: 896 --------NGDDGEGDDETPDESLAED 914