Pairwise Alignments

Query, 879 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit A from Pectobacterium carotovorum WPP14

Subject, 873 a.a., DNA gyrase, A subunit from Dechlorosoma suillum PS

 Score = 1045 bits (2703), Expect = 0.0
 Identities = 522/880 (59%), Positives = 671/880 (76%), Gaps = 10/880 (1%)

Query: 1   MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN 60
           M   A+E  P+++EEE++ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM  LGNDWN
Sbjct: 1   MDQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELGNDWN 60

Query: 61  KPYKKSARVVGDVIGKYHPHGDSAVYETIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
           K YKKSAR+VGDVIGKYHPHGD+AVY+TIVRMAQ FSLRYMLVDGQGNFGS+DGD+AAAM
Sbjct: 61  KAYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120

Query: 121 RYTEIRMSKIAHELLADLEKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMAT 180
           RYTE+RM++I H+LL D++KETVDF PNYDG+EQ P ++P RIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMARIGHQLLEDIDKETVDFGPNYDGSEQEPLILPARIPNLLINGSSGIAVGMAT 180

Query: 181 NIPPHNLTEVVNGCLAYIDDENISLEGLMEHIKGPDFPTAAIINGRRGIEEAYRTGRGKI 240
           NIPPHNL EVV  CLA + + N++++ L++ I  PDFPTA II G  G+ E YRTGRG++
Sbjct: 181 NIPPHNLGEVVAACLALLQNPNLTIDELIDIIPAPDFPTAGIIYGVAGVREGYRTGRGRV 240

Query: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRIEGISALRDESDKDG 300
            +RA+  VE   K  R+ +I+ E+PYQVNK  L+EKI ELV +KRIEGIS LRDESDK G
Sbjct: 241 VMRAKTHVEDLDKGNRQALIIDELPYQVNKRTLLEKIGELVNEKRIEGISDLRDESDKSG 300

Query: 301 MRIVIEIKRDAVGEVVLNNLYSQTQLQTSFGINMVALHQGQPKIMPLKDILVAFVRHRRE 360
           MR+VIE+KR  + EVVLNNL+  TQLQ +FG+NMVAL  GQP+++ LK +L  F+ HRRE
Sbjct: 301 MRVVIELKRGEMPEVVLNNLFKMTQLQDTFGMNMVALVDGQPRLLNLKQMLECFLAHRRE 360

Query: 361 VVTRRTIFELRKARDRAHILEGLAIALANIDPIIELIRRAASPAEAKASLIAQAWELGSV 420
           V+ RRT+FELRKAR++AH  EGLA+AL N+D II LI+ A +PA+A+  L+A+ W   +V
Sbjct: 361 VLNRRTVFELRKAREKAHTQEGLAVALDNVDEIIALIKAAPTPADARRELMARMWVSATV 420

Query: 421 ATMLERAGDDAARPEWLEPEFGIRDGRYYLTEQQAQAILDLRLQKLTGMEHEKLLDEYKE 480
             ML RA  DA RPE + PE+G+    Y LTE QAQAIL+LRLQ+LTG+E +K++ +YKE
Sbjct: 421 TEMLARASLDATRPEGIAPEYGLSAQGYRLTEAQAQAILELRLQRLTGLERDKIVADYKE 480

Query: 481 LLAEIAELLYILNSPERLMEVIREELEAIKTQYSDERRTEITANTADINIEDLINQEDVV 540
           LL +IA+L+ IL  PER+ E+I EEL AI+ Q+ D+RR+EI A   D+ IEDLI  +D+V
Sbjct: 481 LLEKIADLMDILARPERVTEIIGEELTAIRDQFGDDRRSEIVAYAQDLGIEDLITPQDMV 540

Query: 541 VTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY 600
           VTLSH GY+K QPL+DY AQRRGG+GK AA +K++DF+D L VANTHD ILCFS+RGR Y
Sbjct: 541 VTLSHTGYIKSQPLADYRAQRRGGRGKQAAAMKDDDFVDHLFVANTHDYILCFSNRGRCY 600

Query: 601 WMKVYQLPEASRGARGRPIVNLLPLEADERITAILPVREYEEGRHIFMATASGTVKKTAL 660
           W+KVY++P+ SR +RG+PI+N+ P+E  E+I AILPV+E+ + +++FM T  GTVKKT+L
Sbjct: 601 WLKVYEVPQGSRISRGKPIINMFPMEEGEQINAILPVKEFSDDKYVFMCTVQGTVKKTSL 660

Query: 661 TEFSRPRSAGIIAVNLNEGDELIGVDLTDGSDEAMLFSAEGKVVRFSEQAVRSMGRTATG 720
             FS PR AGIIAV+L+EGD LIG DLT G  + +L S  GK V F E  VR MGR + G
Sbjct: 661 ANFSNPRKAGIIAVDLDEGDYLIGADLTTGQSDIVLVSDGGKAVWFGEDQVRPMGRQSRG 720

Query: 721 VRGINLQGEDRVVSLIIPRGEGD-ILTVTQNGFGKRTAVSEYPTKSRATKGVISIKVSER 779
           VRG+ LQ    V+SL++   E + +L  T+NG+GKRT + ++   SR T+GV++I  SER
Sbjct: 721 VRGMMLQEGQSVISLLVAESEEETVLVATENGYGKRTRLGDFRRSSRGTQGVMAIAASER 780

Query: 780 NGKVVGAVQVDAADQIMMITDAGTLVRTRVSEVSIVGRNTQGVTLIRTAEDEHVVGLQRV 839
           NGK+V A  V  AD++M+IT  G L+RTRV+E+  +GR TQGVTLI     E + GL++V
Sbjct: 781 NGKIVAAKLVTDADEVMLITTGGVLIRTRVAEIRELGRATQGVTLISLDAGEKLSGLEKV 840

Query: 840 AEPVEDEELD-GVVKVEGEVAEDDDAIDDIDGDDDIAEDD 878
           AE   D + + G    +GE+ E         G+D  A ++
Sbjct: 841 AESEGDTDAEAGDELADGEMLE--------GGEDSAASEE 872