Pairwise Alignments
Query, 879 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit A from Pectobacterium carotovorum WPP14
Subject, 913 a.a., DNA gyrase, A subunit (RefSeq) from Dinoroseobacter shibae DFL-12
Score = 763 bits (1970), Expect = 0.0
Identities = 414/884 (46%), Positives = 565/884 (63%), Gaps = 62/884 (7%)
Query: 11 VNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWNKPYKKSARVV 70
++I EE+KSSYLDYAMSVIV RA+PD+RDGLKPVHRR+LYAM GN K Y+KSAR V
Sbjct: 25 ISIAEEMKSSYLDYAMSVIVSRAIPDLRDGLKPVHRRILYAMHETGNTHEKAYRKSARPV 84
Query: 71 GDVIGKYHPHGDSAVYETIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIRMSKI 130
GDV+GKYHPHGDSA+Y+ +VRMAQ FS+ L+DGQGNFGS+DGD+ AAMRYTE+RM K
Sbjct: 85 GDVMGKYHPHGDSAIYDALVRMAQDFSMSLPLLDGQGNFGSMDGDNPAAMRYTEVRMDKP 144
Query: 131 AHELLADLEKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMATNIPPHNLTEV 190
A LLAD+EKETVDF NYDG ++ P V+P R PN+LVNG+ GIAVGMATNIPPHNL EV
Sbjct: 145 AAALLADIEKETVDFQDNYDGKDREPTVLPARFPNMLVNGAGGIAVGMATNIPPHNLGEV 204
Query: 191 VNGCLAYIDDENISLEGLMEHIKGPDFPTAAIINGRRGIEEAYRTGRGKIYIRARAEVEA 250
++ LA I+ ++ +E LM++I PDFPT I GR G +AY GRG + IRA+ +E
Sbjct: 205 IDATLALIETPDLEVEDLMQYIPAPDFPTGGQILGRGGARKAYLEGRGSVIIRAKTRIE- 263
Query: 251 DAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRIEGISALRDESDKDGMRIVIEIKRD 310
+ + R I++ EIPYQVNK+ +IEKIAELV++KRIEGI+ ++DESD+ G+R+VIE+KRD
Sbjct: 264 ELRKDRYAIVLDEIPYQVNKSSMIEKIAELVREKRIEGIAHVQDESDRVGVRVVIELKRD 323
Query: 311 AVGEVVLNNLYSQTQLQTSFGINMVALHQGQPKIMPLKDILVAFVRHRREVVTRRTIFEL 370
A EVVLN LY T +QTSFG NM+AL+ G+P+ + LKD L +F+ R EVV RRT ++L
Sbjct: 324 ATPEVVLNQLYRFTPMQTSFGCNMLALNGGRPEQLTLKDFLSSFISFREEVVARRTAYDL 383
Query: 371 RKARDRAHILEGLAIALANIDPIIELIRRAASPAEAKASLIAQAWELGSVATMLERAGDD 430
RKAR+R+H+L GLA+A++N+D ++ IR +A AEA+ L+ + W +A + D
Sbjct: 384 RKARERSHVLCGLAVAVSNVDEVVATIRASADAAEAREKLMTRRWPAADIADYIRLIDDP 443
Query: 431 AARPEWLEPEFGIRDGRYYLTEQQAQAILDLRLQKLTGMEHEKLLDEYKELLAEIAELLY 490
DG Y L+E QA+AILDLRLQ+LT + +++ DE +EL A+I E L
Sbjct: 444 THTMN--------EDGTYNLSETQARAILDLRLQRLTQIGVKEVTDELQELAAKIQEYLD 495
Query: 491 ILNSPERLMEVIREELEAIKTQYSDERRTEITANTADINIEDLINQEDVVVTLSHQGYVK 550
IL S R+M +I +EL +K Q++ RRTEIT + D+ EDLI +ED+VVT++ GY+K
Sbjct: 496 ILRSRSRIMAIISDELREVKDQFAVPRRTEITDWSGDMEDEDLIEREDMVVTVTSGGYIK 555
Query: 551 YQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLYWMKVYQLPEA 610
PL ++ AQRRGGKG + KE+D + L VANTH +L F++ G +Y +K ++LP
Sbjct: 556 RTPLVEFRAQRRGGKGLAGMATKEDDVVTTLFVANTHTPLLVFTTDGMVYKLKTWRLPSG 615
Query: 611 SRGARGRPIVNLLPLEADERITAILPVREYEE---GRHIFMATASGTVKKTALTEFSRPR 667
R ARG+ +VN+LP++ I AI+PV EE I AT++G V++ AL++F+
Sbjct: 616 GRNARGKALVNVLPIDPGTSIAAIMPVDRAEEDWADLQIVFATSAGDVRRNALSDFTNVM 675
Query: 668 SAGIIAVNLNEGDELIGVDLTDGSDEAMLFSAEGKVVRFSEQAVRSM-GRTATGVRGINL 726
G IA+ L EG L+ + D+ ML +A G+ +RF VR GR +TGVRG+ L
Sbjct: 676 RNGKIAMKLPEGVSLVKARICSEEDDVMLVTALGRAIRFRTTDVRVFKGRDSTGVRGVRL 735
Query: 727 QGEDRVVSLIIPR----------------------------------------------- 739
DRVVS+ + R
Sbjct: 736 AEGDRVVSMAVIRHFVADPQERAAYLKMRRAVAGLSEEAESEDEDTVEAGQLSPERYAEM 795
Query: 740 --GEGDILTVTQNGFGKRTAVSEYPTKSRATKGVISIKVSERNGKVVGAVQVDAADQIMM 797
E ILT+T+ G GK ++ +YP + R +GV ++ + R G +V V+ DQIM+
Sbjct: 796 SAAEDLILTITEGGTGKISSSHDYPVRGRGGQGVTAMDKAMRGGPLVACFPVEIDDQIML 855
Query: 798 ITDAGTLVRTRVSEVSIVGRNTQGVTLIRTAEDEHVVGLQRVAE 841
T G +R V +S R GV + TA E VV + +A+
Sbjct: 856 ATSTGQSIRCPVDGISFRSRAAGGVKVFNTAPGEQVVSVAYIAD 899
Score = 30.8 bits (68), Expect = 4e-04
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 646 IFMATASGTVKKTALTEFS-RPRSA-GIIAVN-LNEGDELIGVDLTDGSDEAMLFSAEGK 702
I T GT K ++ ++ R R G+ A++ G L+ + D+ ML ++ G+
Sbjct: 802 ILTITEGGTGKISSSHDYPVRGRGGQGVTAMDKAMRGGPLVACFPVEIDDQIMLATSTGQ 861
Query: 703 VVRFSEQAVRSMGRTATGVRGINLQGEDRVVSL--IIPRGEGD 743
+R + R A GV+ N ++VVS+ I RGE D
Sbjct: 862 SIRCPVDGISFRSRAAGGVKVFNTAPGEQVVSVAYIADRGEAD 904