Pairwise Alignments

Query, 879 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit A from Pectobacterium carotovorum WPP14

Subject, 918 a.a., DNA gyrase subunit A (RefSeq) from Shewanella sp. ANA-3

 Score = 1278 bits (3307), Expect = 0.0
 Identities = 657/913 (71%), Positives = 760/913 (83%), Gaps = 37/913 (4%)

Query: 1   MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN 60
           M+DLA  I+P+NIE+ELK+SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMS L NDWN
Sbjct: 1   MTDLASSISPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELKNDWN 60

Query: 61  KPYKKSARVVGDVIGKYHPHGDSAVYETIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
           KPYKKSARVVGDVIGKYHPHGDSAVY+TIVRMAQPFSLRY LVDGQGNFGS+DGDSAAAM
Sbjct: 61  KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYTLVDGQGNFGSVDGDSAAAM 120

Query: 121 RYTEIRMSKIAHELLADLEKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMAT 180
           RYTEIRM K+AH+LLADLEKETVD+VPNYDGTEQIP V+PTR+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMDKLAHQLLADLEKETVDYVPNYDGTEQIPAVLPTRVPNLLINGSSGIAVGMAT 180

Query: 181 NIPPHNLTEVVNGCLAYIDDENISLEGLMEHIKGPDFPTAAIINGRRGIEEAYRTGRGKI 240
           NIPPHNLTEVV GCLA I D  +S+E LMEHI GPDFPTAAIINGR+GI +AY+TGRG+ 
Sbjct: 181 NIPPHNLTEVVKGCLALIADPALSIEQLMEHIPGPDFPTAAIINGRKGIIDAYKTGRGRA 240

Query: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRIEGISALRDESDKDG 300
            +RA AEVE +   GRE IIV EIPYQVNKA+LIEKIAELVKDK+IEGIS LRDESDKDG
Sbjct: 241 VMRALAEVETE-DNGRERIIVTEIPYQVNKAKLIEKIAELVKDKKIEGISGLRDESDKDG 299

Query: 301 MRIVIEIKRDAVGEVVLNNLYSQTQLQTSFGINMVALHQGQPKIMPLKDILVAFVRHRRE 360
           MRIVIEIKR  VGEVVLNNLY+QTQ+Q SFGINMVAL  GQPK+  LK++L  F+ HRRE
Sbjct: 300 MRIVIEIKRGEVGEVVLNNLYAQTQMQCSFGINMVALTNGQPKLFNLKEMLECFILHRRE 359

Query: 361 VVTRRTIFELRKARDRAHILEGLAIALANIDPIIELIRRAASPAEAKASLIAQAWELGSV 420
           VVTRRT+FELRKAR+RAHILE LA+ALANIDPII LI+ + +PA+AK  L+ Q W LG V
Sbjct: 360 VVTRRTVFELRKARERAHILEALAVALANIDPIIALIKASPTPADAKVKLVEQGWALGHV 419

Query: 421 ATMLERAGDDAARPEWLEPEFGIRDGRYYLTEQQAQAILDLRLQKLTGMEHEKLLDEYKE 480
             MLE+AGDDAARPEWLEPEFGIRDG YYLTEQQAQAIL+LRL +LTG+EH+K++ EY+E
Sbjct: 420 QGMLEKAGDDAARPEWLEPEFGIRDGLYYLTEQQAQAILELRLHRLTGLEHDKIIAEYEE 479

Query: 481 LLAEIAELLYILNSPERLMEVIREELEAIKTQYSDERRTEITANTADINIEDLINQEDVV 540
           LL  IA LL+IL SPERLMEVI+EELE I  +Y D RRT I AN  D+++EDLIN+EDVV
Sbjct: 480 LLEFIAGLLFILRSPERLMEVIKEELEEILAEYGDARRTVINANEIDMSLEDLINEEDVV 539

Query: 541 VTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY 600
           VTLSH GY KYQPLSDY+AQRRGGKGK+A ++K+EDF+++LLVANTHDTILCFS  G++Y
Sbjct: 540 VTLSHLGYAKYQPLSDYQAQRRGGKGKAATKVKDEDFVEKLLVANTHDTILCFSDFGKMY 599

Query: 601 WMKVYQLPEASRGARGRPIVNLLPLEADERITAILPVREYEEGRHIFMATASGTVKKTAL 660
           W+KVYQLP ASR +RGRPIVNLLPL   ERITAILPVREY E ++I MAT++GTVKKTAL
Sbjct: 600 WLKVYQLPLASRTSRGRPIVNLLPLSDGERITAILPVREYAEDKYIIMATSNGTVKKTAL 659

Query: 661 TEFSRPRSAGIIAVNLNEGDELIGVDLTDGSDEAMLFSAEGKVVRFSE------------ 708
           T +S PR+ GIIAVNL +GD+LIGVD+T+G DE MLFS EGKVVRF E            
Sbjct: 660 TAYSNPRANGIIAVNLKDGDQLIGVDITNGDDEIMLFSNEGKVVRFKEGEEVAVLDENGN 719

Query: 709 -------------QAVRSMGRTATGVRGINLQGEDRVVSLIIPRGEGDILTVTQNGFGKR 755
                        + VR MGR ATGVRGI L+   RVVSLI+P+G+G ILTVT+NG+GKR
Sbjct: 720 AVLDEEGNPQINFKGVRPMGRGATGVRGIKLEEGQRVVSLIVPKGDGAILTVTENGYGKR 779

Query: 756 TAVSEYPTKSRATKGVISIKVSERNGKVVGAVQVDAADQIMMITDAGTLVRTRVSEVSIV 815
           T +SEYP+KSRATKGV+SIKVSERNG VVGAVQV   D+IM+I+D GTLVRT  + VSI+
Sbjct: 780 TELSEYPSKSRATKGVVSIKVSERNGAVVGAVQVGGNDEIMLISDKGTLVRTPANGVSII 839

Query: 816 GRNTQGVTLIRTAEDEHVVGLQRVAEPVEDE---ELDG------VVKVEGEVAEDDDAID 866
           GRNTQGVT+IRTA DE VVGLQR+ E   DE   ELD        V  EG+  +++   D
Sbjct: 840 GRNTQGVTIIRTASDEKVVGLQRIDEIQGDEDEVELDENGMPIVPVVTEGDSVQEEPLED 899

Query: 867 DIDGDDDIAEDDE 879
           ++  ++++ ED+E
Sbjct: 900 EL--EEELDEDEE 910