Pairwise Alignments

Query, 298 a.a., amino acid ABC transporter substrate-binding protein from Pectobacterium carotovorum WPP14

Subject, 305 a.a., extracellular solute-binding protein, family 3 (NCBI) from Rhodospirillum rubrum S1H

 Score =  274 bits (701), Expect = 2e-78
 Identities = 147/297 (49%), Positives = 190/297 (63%), Gaps = 1/297 (0%)

Query: 1   MQMRKLALSLLLLGTAASVAQAEDLAGTLKKVKDNGVIVIGHRESSVPFSYYDNTQKVVG 60
           M  + +       G  A  A AE+L GTLKK+K+ G I IGHR+SS+PFSY D+ QK +G
Sbjct: 1   MSFKHVVALAAAFGLLAGSASAEELTGTLKKIKETGEIAIGHRDSSIPFSYLDDNQKPIG 60

Query: 61  YSQAYSDKIVEAVKKKLDAPNLQVKLLPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA 120
           Y+      +VEAVK +L    L VKL P+TS  RIPL+ NGT D ECGSTTNNL+RQ+QA
Sbjct: 61  YAMDICAHVVEAVKAELKLDTLAVKLTPVTSATRIPLIANGTVDLECGSTTNNLDRQQQA 120

Query: 121 AFSNTIFVVGTRLLTKKDSGVKDFPDLAGKTVVVTSGTTSEVLLNKLNEEKQLKMRIISA 180
           +F+N+ F+  +R ++KK S +K   DL GKTVV T+GTT+   +N+LN  + L ++II A
Sbjct: 121 SFTNSHFLTASRFVSKKTSNLKSIDDLKGKTVVSTAGTTNIKQVNELNTARGLGIKIIPA 180

Query: 181 KDHGDSFRTLESGRAVAFMMDDALLAGERAKAKNADQWDIVGKAQS-EEAYGCMLRKDDP 239
           KDH + F  +E+ RAVAF MDD LLA   A +K    + I   A S  E YG MLRKDDP
Sbjct: 181 KDHAEGFLMVETDRAVAFAMDDILLATLVAGSKTPSAYVISEDAFSLPEPYGIMLRKDDP 240

Query: 240 QFKKLVDDTIAEVQTSGEAEKWFDRWFKQPIPPKDLNLNFALSDEMKALFKAPNDKA 296
            FK +VD   A + TS E  K F +WF+ PIPPK LN+N  L+  MK     P+D A
Sbjct: 241 AFKAVVDRATAALYTSPEGPKLFAKWFENPIPPKGLNVNLPLAGAMKNALAHPSDSA 297